Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL158196.1-201ENST00000616786 434 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC138932.5-201ENST00000617759 563 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 AC009318.4-201ENST00000620496 486 ntBASIC4.4□□□□□ -1.71
COL15A1P39059 OTUD4P1-201ENST00000237841 3067 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL15A1P39059 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.39□□□□□ -1.71
COL15A1P39059 MTND5P29-201ENST00000458676 1807 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL15A1P39059 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 Y_RNA.97-201ENST00000363094 102 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 RNVU1-3-201ENST00000364313 161 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 SNORA75-201ENST00000384158 137 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AL357075.1-201ENST00000404107 726 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 MIR1305-201ENST00000408300 86 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.39□□□□□ -1.71
COL15A1P39059 RN7SKP266-201ENST00000410232 287 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 Y_RNA.599-201ENST00000410489 109 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 RPS3AP44-201ENST00000425466 790 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 RPL31P50-201ENST00000471002 296 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AC022447.3-201ENST00000506865 495 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL15A1P39059 AC034159.1-201ENST00000513885 583 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AC016065.2-201ENST00000514530 444 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 IGLVIV-53-201ENST00000520107 367 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 OR5AP1P-201ENST00000529730 940 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.39□□□□□ -1.71
COL15A1P39059 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.39□□□□□ -1.71
COL15A1P39059 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 AC005771.1-201ENST00000585581 349 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 CKS1BP3-201ENST00000600888 237 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AL009028.1-201ENST00000604895 802 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AC116312.1-201ENST00000606841 314 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.39□□□□□ -1.71
COL15A1P39059 AL359740.1-201ENST00000624340 592 ntBASIC4.39□□□□□ -1.71
COL15A1P39059 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.38□□□□□ -1.71
COL15A1P39059 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
COL15A1P39059 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
COL15A1P39059 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 RNA5SP197-201ENST00000363357 119 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 SNORD82-201ENST00000365530 70 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.38□□□□□ -1.71
COL15A1P39059 Y_RNA.500-201ENST00000384466 111 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 UBA52P6-201ENST00000399822 382 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 OFD1P18Y-201ENST00000420889 959 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 MTCO2P5-201ENST00000422621 426 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 GLRXP1-201ENST00000423261 334 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 USP9YP14-201ENST00000430663 563 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 RPS24P1-201ENST00000438550 371 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC002381.1-201ENST00000447049 280 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC005297.2-201ENST00000450430 606 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 BX276092.4-201ENST00000452056 248 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 RPS4XP2-201ENST00000458402 793 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 FABP5P5-201ENST00000515537 406 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 RNU6-405P-201ENST00000516637 110 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.38□□□□□ -1.71
COL15A1P39059 AC090136.1-201ENST00000520009 240 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.38□□□□□ -1.71
COL15A1P39059 EIF4BP1-201ENST00000554881 351 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC245505.1-201ENST00000556398 224 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 ZNF519P3-201ENST00000557158 1032 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.38□□□□□ -1.71
COL15A1P39059 AC073648.5-201ENST00000603502 305 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 YWHAQP7-201ENST00000603536 658 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 RPL23AP92-201ENST00000603609 255 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 TEX21P-201ENST00000447107 1476 ntBASIC4.38□□□□□ -1.71
COL15A1P39059 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL15A1P39059 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
COL15A1P39059 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 RNU6-809P-201ENST00000384461 107 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms