Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP001542.2-201ENST00000593141 364 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 LLPHP1-201ENST00000603571 367 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 HMGN2P28-201ENST00000606102 262 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
COL4A5P29400 MTND4P31-201ENST00000425607 1343 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AC092447.7-201ENST00000422212 1621 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A5P29400 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A5P29400 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 RPL7P53-201ENST00000421245 739 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.2□□□□□ -2.06
COL4A5P29400 ARL5AP2-201ENST00000444698 533 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 KPNA2P1-201ENST00000458289 1591 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 RPL30P11-201ENST00000495304 339 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A5P29400 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A5P29400 MLLT10P2-201ENST00000506434 249 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 RNA5SP309-201ENST00000516670 106 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AC067904.2-201ENST00000517322 1283 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A5P29400 VN1R74P-201ENST00000613259 503 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AL589935.2-201ENST00000616471 1231 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 AL353748.2-201ENST00000622148 471 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 MIR4278-201ENST00000636094 69 ntBASIC2.2□□□□□ -2.06
COL4A5P29400 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
COL4A5P29400 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A5P29400 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A5P29400 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A5P29400 MIR613-201ENST00000385248 95 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 DNAJC19P6-201ENST00000401853 280 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 AL513331.1-201ENST00000411908 397 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 AC007390.1-201ENST00000415722 356 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 EIF1AXP1-201ENST00000419267 435 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 NDUFA5P10-201ENST00000432147 357 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A5P29400 AC092473.1-201ENST00000441098 221 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A5P29400 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A5P29400 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A5P29400 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A5P29400 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A5P29400 VIS1.1-201ENST00000610517 203 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 AC022079.2-201ENST00000619739 566 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 AC048347.1-201ENST00000624621 427 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A5P29400 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A5P29400 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A5P29400 AC007256.1-201ENST00000392253 2765 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
COL4A5P29400 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
COL4A5P29400 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 SNORA31-201ENST00000362607 130 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 RNU6-819P-201ENST00000364116 107 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 AC234782.4-201ENST00000417646 1048 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC023347.2-201ENST00000433994 462 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 RPL23AP58-201ENST00000440453 469 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A5P29400 PCNAP1-201ENST00000505363 709 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 MTCO1P30-201ENST00000515244 580 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 RN7SKP234-201ENST00000517173 224 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC138473.1-201ENST00000605717 526 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 AC103988.1-201ENST00000566382 2177 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 RNU6-707P-201ENST00000364647 95 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 PRELID3BP11-201ENST00000414230 479 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A5P29400 TRAV31-201ENST00000502780 342 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 RNU6-1308P-201ENST00000516817 103 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A5P29400 AC009314.1-201ENST00000603871 304 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 AC010872.1-201ENST00000624225 675 ntBASIC2.18□□□□□ -2.06
COL4A5P29400 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A5P29400 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A5P29400 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A5P29400 SNORA67.5-201ENST00000391036 107 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 RPS7P9-201ENST00000414704 586 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A5P29400 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A5P29400 AC092798.1-201ENST00000458542 409 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 RNU6-1004P-201ENST00000516584 111 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A5P29400 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A5P29400 ZNF92P3-201ENST00000596594 954 ntBASIC2.17□□□□□ -2.06
COL4A5P29400 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A5P29400 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A5P29400 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms