Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN4P29074 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN4P29074 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN4P29074 OR4G11P-202ENST00000642116 1414 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 CR383658.2-201ENST00000547576 1525 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 RNU4-92P-201ENST00000363783 136 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 SNORD116.1-201ENST00000365628 92 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN4P29074 AL592310.1-201ENST00000414330 671 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 SSR1P2-201ENST00000415208 787 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 RPL27AP8-201ENST00000424277 446 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 UBE2D3P2-201ENST00000424409 445 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 USP9YP36-201ENST00000424581 829 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 MTCO1P39-201ENST00000426148 480 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC093151.1-201ENST00000427711 313 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC079780.1-201ENST00000428259 207 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC091862.1-201ENST00000438016 1100 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 RPL23AP76-201ENST00000441860 458 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 FAM172BP-201ENST00000487497 1089 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN4P29074 AC110794.1-201ENST00000505816 425 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC111000.2-201ENST00000507775 550 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN4P29074 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 AP000889.1-201ENST00000530968 660 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN4P29074 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN4P29074 OR4H12P-201ENST00000556269 907 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC090695.1-201ENST00000561269 1222 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 LARP7P2-201ENST00000575306 125 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN4P29074 AP001269.3-201ENST00000588718 329 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN4P29074 AL031176.1-201ENST00000604554 466 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AP002826.1-201ENST00000608835 315 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 uc_338.1-201ENST00000612113 180 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC068787.1-201ENST00000623908 691 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC091903.1-201ENST00000624322 454 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AC084035.1-201ENST00000634543 607 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN4P29074 ZNF833P-201ENST00000424938 1494 ntBASIC3.2□□□□□ -1.9
PTPN4P29074 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
PTPN4P29074 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPN4P29074 Y_RNA.408-201ENST00000383987 102 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RNU6-636P-201ENST00000384598 107 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RNA5SP80-201ENST00000410475 111 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN4P29074 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN4P29074 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN4P29074 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN4P29074 Z82190.1-201ENST00000454534 490 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RPL18AP17-201ENST00000455326 198 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN4P29074 AP001992.1-205ENST00000462248 379 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 AC108860.1-201ENST00000484521 383 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC108729.1-201ENST00000487812 947 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC020699.1-201ENST00000505161 445 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC008837.2-201ENST00000513076 418 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC009712.1-201ENST00000564938 316 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC090615.1-201ENST00000577519 154 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 CKS1BP3-201ENST00000600888 237 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC106791.2-201ENST00000604680 391 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AC106900.2-201ENST00000604994 317 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 AP003122.6-201ENST00000623831 495 ntBASIC3.19□□□□□ -1.9
PTPN4P29074 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN4P29074 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
PTPN4P29074 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN4P29074 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN4P29074 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN4P29074 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN4P29074 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN4P29074 RPL23AP57-201ENST00000332361 466 ntBASIC3.18□□□□□ -1.9
PTPN4P29074 RNU6-621P-201ENST00000364752 109 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms