Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 RNA5SP213-201ENST00000391031 106 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 RNU6-321P-201ENST00000410912 106 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 MTCYBP7-201ENST00000419540 1134 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC048351.1-201ENST00000420064 602 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC023128.2-201ENST00000420880 1223 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 TRIAP1P1-201ENST00000427062 225 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 Z98742.2-201ENST00000431564 187 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 AP000705.1-201ENST00000454567 350 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC112673.1-201ENST00000513168 575 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC026407.1-201ENST00000518369 204 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC023043.3-201ENST00000593113 385 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC084373.1-201ENST00000603311 235 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC018754.1-201ENST00000607486 925 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
COL5A1P20908 AP000770.2-201ENST00000623694 100 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC006927.2-201ENST00000639256 389 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 Z99496.1-201ENST00000469424 1477 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL5A1P20908 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL5A1P20908 RNU4-31P-201ENST00000384211 141 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 UBE2V1P11-201ENST00000411559 285 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 VPS26BP1-201ENST00000417155 755 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 NDUFA5P10-201ENST00000432147 357 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC010881.1-201ENST00000433830 235 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 Z73417.1-201ENST00000447373 778 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 MTND1P31-201ENST00000449206 961 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.24□□□□□ -2.05
COL5A1P20908 RN7SKP82-201ENST00000516786 223 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 HMGB1P41-201ENST00000520234 440 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL5A1P20908 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.24□□□□□ -2.05
COL5A1P20908 OR5BN1P-201ENST00000532955 829 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 AC123904.3-201ENST00000547218 814 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC078814.3-201ENST00000553036 491 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 MTCYBP28-201ENST00000566728 1132 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 MIR548Y-201ENST00000582739 110 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AL645944.1-201ENST00000603857 493 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AL450336.1-201ENST00000605180 586 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 RNU4-5P-201ENST00000607255 135 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC087683.2-201ENST00000611384 326 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC009159.2-201ENST00000617603 606 ntBASIC2.24□□□□□ -2.05
COL5A1P20908 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.24□□□□□ -2.05
COL5A1P20908 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 MFSD8-213ENST00000641134 1327 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 CUL1P1-201ENST00000509510 2425 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC022336.2-201ENST00000568966 2538 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 RNU4-28P-201ENST00000364739 141 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 Y_RNA.355-201ENST00000365462 98 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 RNU6-932P-201ENST00000391108 106 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 HMGB1P13-201ENST00000406019 642 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 HMGB3P31-201ENST00000413333 595 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC093422.3-201ENST00000428506 305 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 FO393414.1-201ENST00000428697 1184 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.23□□□□□ -2.05
COL5A1P20908 CASP3P1-201ENST00000446037 609 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AL354710.1-201ENST00000453641 246 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 RPL23AP42-201ENST00000471152 471 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AL024509.2-201ENST00000493462 493 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.23□□□□□ -2.05
COL5A1P20908 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
COL5A1P20908 RNU6-1053P-201ENST00000515930 101 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 RN7SKP265-201ENST00000516448 223 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 RNU6-826P-201ENST00000516827 104 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AC091163.3-201ENST00000518269 1144 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.23□□□□□ -2.05
COL5A1P20908 OR10V3P-201ENST00000525712 725 ntBASIC2.23□□□□□ -2.05
COL5A1P20908 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL5A1P20908 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms