Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC116618.1-201ENST00000634617 774 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 FAM35BP-202ENST00000497389 3337 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-DPA1P20036 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 TAF9BP1-201ENST00000396646 746 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AL356320.2-201ENST00000417263 507 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 NDUFB4P7-201ENST00000423198 363 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 BX119904.4-201ENST00000424402 301 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 TAAR7P-201ENST00000436141 242 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 EXOSC3P1-201ENST00000448649 500 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 RPL7P5-201ENST00000471472 736 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 OR5G4P-201ENST00000525251 760 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 CKS1BP3-201ENST00000600888 237 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AC009464.1-201ENST00000615731 469 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AP000676.4-201ENST00000624659 623 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 AL445984.1-201ENST00000637834 659 ntBASIC3.27□□□□□ -1.89
HLA-DPA1P20036 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPA1P20036 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 OR4G2P-202ENST00000641004 1759 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNU6-1078P-201ENST00000364522 103 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNU6-621P-201ENST00000364752 109 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNU6-1207P-201ENST00000384343 107 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 MIR514A1-201ENST00000385133 98 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 U3.19-201ENST00000390893 196 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNU4-22P-201ENST00000411058 166 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RPS7P13-201ENST00000413955 498 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 ELOCP23-201ENST00000452014 332 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 RNU6-420P-201ENST00000458780 107 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC005410.1-202ENST00000460347 485 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AL353997.4-201ENST00000586196 166 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AP001269.3-201ENST00000588718 329 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 MTND3P19-201ENST00000603825 345 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC013553.2-201ENST00000604244 589 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AC096577.2-201ENST00000611455 153 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 AL159972.1-201ENST00000625150 448 ntBASIC3.26□□□□□ -1.89
HLA-DPA1P20036 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPA1P20036 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RNU5E-8P-201ENST00000363502 116 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RNU6-359P-201ENST00000365466 108 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 SNORA36C-201ENST00000384289 132 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 Y_RNA.465-201ENST00000384293 102 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AL953862.1-201ENST00000423016 168 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RPL7L1P10-201ENST00000427790 463 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 BX890604.2-201ENST00000427883 474 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 OR10R1P-201ENST00000441524 1141 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 MTND1P31-201ENST00000449206 961 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 snoU13.28-201ENST00000459235 104 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms