Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 Z82210.1-201ENST00000440037 231 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AL359672.1-201ENST00000442302 409 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 RNU7-138P-201ENST00000459479 64 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC026801.1-201ENST00000497178 464 ntBASIC4.62□□□□□ -1.67
ATF4P18848 LSM3P4-201ENST00000502948 309 ntBASIC4.62□□□□□ -1.67
ATF4P18848 MTND5P5-201ENST00000503764 376 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 RNA5SP441-201ENST00000516809 88 ntBASIC4.62□□□□□ -1.67
ATF4P18848 RN7SKP289-201ENST00000517244 295 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.62□□□□□ -1.67
ATF4P18848 IGKV2D-19-201ENST00000523346 262 ntBASIC4.62□□□□□ -1.67
ATF4P18848 TRIM77BP-201ENST00000524985 1119 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.62□□□□□ -1.67
ATF4P18848 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.62□□□□□ -1.67
ATF4P18848 AC005363.1-201ENST00000530779 351 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.62□□□□□ -1.67
ATF4P18848 AC006349.1-201ENST00000555526 235 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.62□□□□□ -1.67
ATF4P18848 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.62□□□□□ -1.67
ATF4P18848 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.62□□□□□ -1.67
ATF4P18848 LRRC37A5P-203ENST00000580181 585 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC068768.2-201ENST00000602352 343 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 AC020910.2-201ENST00000603635 610 ntBASIC4.62□□□□□ -1.67
ATF4P18848 AC064836.2-201ENST00000609491 462 ntBASIC4.62□□□□□ -1.67
ATF4P18848 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.62□□□□□ -1.67
ATF4P18848 FAM157A-202ENST00000615155 405 ntBASIC4.62□□□□□ -1.67
ATF4P18848 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.62□□□□□ -1.67
ATF4P18848 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.62□□□□□ -1.67
ATF4P18848 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATF4P18848 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
ATF4P18848 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ATF4P18848 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.62□□□□□ -1.67
ATF4P18848 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.62□□□□□ -1.67
ATF4P18848 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATF4P18848 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 AL672296.1-201ENST00000427780 2158 ntBASIC4.61□□□□□ -1.67
ATF4P18848 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 AL450345.1-202ENST00000605741 3881 ntBASIC4.61□□□□□ -1.67
ATF4P18848 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
ATF4P18848 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 FRG1CP-201ENST00000358464 769 ntBASIC4.61□□□□□ -1.67
ATF4P18848 Y_RNA.135-201ENST00000363439 95 ntBASIC4.61□□□□□ -1.67
ATF4P18848 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 RNU6-607P-201ENST00000411283 108 ntBASIC4.61□□□□□ -1.67
ATF4P18848 VDAC1P9-201ENST00000412766 841 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.61□□□□□ -1.67
ATF4P18848 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.61□□□□□ -1.67
ATF4P18848 AC104333.2-201ENST00000422630 192 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.61□□□□□ -1.67
ATF4P18848 FABP5P14-201ENST00000437273 393 ntBASIC4.61□□□□□ -1.67
ATF4P18848 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.61□□□□□ -1.67
ATF4P18848 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATF4P18848 MTND1P17-201ENST00000448961 204 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 AC104472.2-201ENST00000469035 601 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC087884.1-201ENST00000469738 328 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 RPL30P5-201ENST00000494923 336 ntBASIC4.61□□□□□ -1.67
ATF4P18848 HMGB3P16-201ENST00000508037 287 ntBASIC4.61□□□□□ -1.67
ATF4P18848 RNU6-1153P-201ENST00000516760 105 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC087369.1-201ENST00000520775 996 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.61□□□□□ -1.67
ATF4P18848 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATF4P18848 AC026371.1-201ENST00000551867 419 ntBASIC4.61□□□□□ -1.67
ATF4P18848 AC124916.2-201ENST00000604416 224 ntBASIC4.61□□□□□ -1.67
ATF4P18848 NUTF2P8-201ENST00000604593 363 ntBASIC4.61□□□□□ -1.67
ATF4P18848 uc_338.26-201ENST00000612659 160 ntBASIC4.61□□□□□ -1.67
ATF4P18848 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.61□□□□□ -1.67
ATF4P18848 MTND4P23-201ENST00000447723 1363 ntBASIC4.61□□□□□ -1.67
ATF4P18848 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.61□□□□□ -1.67
ATF4P18848 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
ATF4P18848 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATF4P18848 AC005183.1-201ENST00000603687 1979 ntBASIC4.6□□□□□ -1.67
ATF4P18848 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
ATF4P18848 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.6□□□□□ -1.67
ATF4P18848 RPL32P3-201ENST00000359025 275 ntBASIC4.6□□□□□ -1.67
ATF4P18848 MIR412-201ENST00000362142 91 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RNA5SP435-201ENST00000364044 108 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RNU105B-201ENST00000364478 208 ntBASIC4.6□□□□□ -1.67
ATF4P18848 RNU6-1303P-201ENST00000364841 107 ntBASIC4.6□□□□□ -1.67
ATF4P18848 Y_RNA.482-201ENST00000384377 111 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AL391417.1-201ENST00000404100 426 ntBASIC4.6□□□□□ -1.67
ATF4P18848 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.6□□□□□ -1.67
ATF4P18848 AL035422.1-201ENST00000414193 397 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms