Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN1P18031 AL031666.3-201ENST00000609320 1006 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 AC006329.2-201ENST00000611491 394 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 AC131238.1-201ENST00000617135 328 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 uc_338.13-201ENST00000618243 179 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN1P18031 TPTEP1-208ENST00000636884 213 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN1P18031 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN1P18031 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PTPN1P18031 AC004972.1-201ENST00000623934 2209 ntBASIC4.68□□□□□ -1.66
PTPN1P18031 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN1P18031 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN1P18031 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 RPL32P3-201ENST00000359025 275 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 RNU6-1078P-201ENST00000364522 103 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 RNU6-193P-201ENST00000410977 107 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 OR1AA1P-201ENST00000419597 916 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 DUTP6-201ENST00000425573 462 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 AC091390.1-201ENST00000433904 331 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 MTATP6P16-201ENST00000434543 526 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN1P18031 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN1P18031 HMGB3P9-201ENST00000441799 583 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC073587.1-201ENST00000447093 876 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 RPS17P13-201ENST00000448974 407 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 MTND3P16-201ENST00000452205 344 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 RN7SL303P-201ENST00000469773 251 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC126389.1-201ENST00000477436 290 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN1P18031 AC026979.1-201ENST00000492525 396 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC026427.2-201ENST00000506228 536 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 RNU4-29P-201ENST00000515943 174 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 SCARNA15.1-201ENST00000516384 125 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 RNU6-1314P-201ENST00000517139 104 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 AL133153.1-201ENST00000557756 303 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 RPL7P50-201ENST00000600588 727 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AL355812.1-201ENST00000603215 216 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC091979.2-201ENST00000607514 214 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AC083809.1-201ENST00000615051 472 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 RMST_7.1-201ENST00000621935 268 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 AP000843.1-201ENST00000624880 701 ntBASIC4.67□□□□□ -1.66
PTPN1P18031 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
PTPN1P18031 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN1P18031 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN1P18031 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN1P18031 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN1P18031 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN1P18031 MTND4P35-201ENST00000604257 1375 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN1P18031 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PTPN1P18031 EIF2AP4-201ENST00000424793 1781 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN1P18031 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PTPN1P18031 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN1P18031 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
PTPN1P18031 RNA5SP307-201ENST00000362863 116 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 Y_RNA.231-201ENST00000364358 102 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 RNU6-641P-201ENST00000384006 107 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 MT-TC-201ENST00000387405 66 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 RNU6-1148P-201ENST00000410992 104 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 VDAC1P9-201ENST00000412766 841 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 MTND3P8-201ENST00000412909 339 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.66□□□□□ -1.66
PTPN1P18031 OR2AS1P-201ENST00000427827 319 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 IFNA20P-201ENST00000436840 528 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 RPS29P15-201ENST00000458329 171 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 RPS23P7-201ENST00000466210 444 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 ST13P14-201ENST00000474095 734 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN1P18031 RN7SL812P-201ENST00000493791 279 ntBASIC4.66□□□□□ -1.66
PTPN1P18031 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN1P18031 AC112206.3-201ENST00000514578 389 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms