Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-954P-201ENST00000411355 107 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.43□□□□□ -1.86
VTNP04004 AC127526.1-201ENST00000417526 366 ntBASIC3.43□□□□□ -1.86
VTNP04004 RPL7P30-201ENST00000420888 709 ntBASIC3.43□□□□□ -1.86
VTNP04004 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.43□□□□□ -1.86
VTNP04004 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.43□□□□□ -1.86
VTNP04004 ZYG11AP1-201ENST00000430329 837 ntBASIC3.43□□□□□ -1.86
VTNP04004 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.43□□□□□ -1.86
VTNP04004 AL117351.1-201ENST00000438864 766 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.43□□□□□ -1.86
VTNP04004 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.43□□□□□ -1.86
VTNP04004 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 MEMO1P3-201ENST00000459811 302 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC026410.2-201ENST00000460281 156 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 AC114981.1-201ENST00000503897 678 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC111000.2-201ENST00000507775 550 ntBASIC3.43□□□□□ -1.86
VTNP04004 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
VTNP04004 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 RNA5SP309-201ENST00000516670 106 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC104986.1-201ENST00000517978 436 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.43□□□□□ -1.86
VTNP04004 AP004242.1-201ENST00000533701 349 ntBASIC3.43□□□□□ -1.86
VTNP04004 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.43□□□□□ -1.86
VTNP04004 AC007954.1-201ENST00000554198 494 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 AL669831.4-202ENST00000590817 238 ntBASIC3.43□□□□□ -1.86
VTNP04004 SNRPGP15-201ENST00000600149 222 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC010620.1-201ENST00000601088 1102 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC013444.2-201ENST00000603317 787 ntBASIC3.43□□□□□ -1.86
VTNP04004 AL596327.1-201ENST00000603629 213 ntBASIC3.43□□□□□ -1.86
VTNP04004 DUXAP11-201ENST00000603858 526 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC018714.1-201ENST00000605028 208 ntBASIC3.43□□□□□ -1.86
VTNP04004 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.43□□□□□ -1.86
VTNP04004 CYP3A51P-201ENST00000633513 256 ntBASIC3.43□□□□□ -1.86
VTNP04004 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.43□□□□□ -1.86
VTNP04004 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
VTNP04004 AC007496.3-201ENST00000624987 3443 ntBASIC3.43□□□□□ -1.86
VTNP04004 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 GDI2P1-201ENST00000429312 1336 ntBASIC3.43□□□□□ -1.86
VTNP04004 AC011477.1-204ENST00000623416 1325 ntBASIC3.43□□□□□ -1.86
VTNP04004 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.42□□□□□ -1.86
VTNP04004 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VTNP04004 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 RPL21P132-201ENST00000331267 462 ntBASIC3.42□□□□□ -1.86
VTNP04004 Y_RNA.111-201ENST00000363248 100 ntBASIC3.42□□□□□ -1.86
VTNP04004 RNA5SP189-201ENST00000364920 115 ntBASIC3.42□□□□□ -1.86
VTNP04004 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.42□□□□□ -1.86
VTNP04004 RNU6-837P-201ENST00000391056 108 ntBASIC3.42□□□□□ -1.86
VTNP04004 U3.26-201ENST00000391236 204 ntBASIC3.42□□□□□ -1.86
VTNP04004 RPL31P1-201ENST00000398116 372 ntBASIC3.42□□□□□ -1.86
VTNP04004 DHFRP6-201ENST00000401776 268 ntBASIC3.42□□□□□ -1.86
VTNP04004 MIR1302-8-201ENST00000408342 128 ntBASIC3.42□□□□□ -1.86
VTNP04004 COTL1P1-201ENST00000422309 375 ntBASIC3.42□□□□□ -1.86
VTNP04004 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.42□□□□□ -1.86
VTNP04004 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.42□□□□□ -1.86
VTNP04004 RPL23AP74-201ENST00000437246 471 ntBASIC3.42□□□□□ -1.86
VTNP04004 AL138799.3-201ENST00000438968 350 ntBASIC3.42□□□□□ -1.86
VTNP04004 NPM1P49-201ENST00000448027 714 ntBASIC3.42□□□□□ -1.86
VTNP04004 AC005297.2-201ENST00000450430 606 ntBASIC3.42□□□□□ -1.86
VTNP04004 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.42□□□□□ -1.86
VTNP04004 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.42□□□□□ -1.86
VTNP04004 MTND3P7-201ENST00000474435 343 ntBASIC3.42□□□□□ -1.86
VTNP04004 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VTNP04004 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.42□□□□□ -1.86
VTNP04004 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
VTNP04004 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.42□□□□□ -1.86
VTNP04004 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VTNP04004 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.42□□□□□ -1.86
VTNP04004 AC135628.1-201ENST00000568867 534 ntBASIC3.42□□□□□ -1.86
VTNP04004 LARP7P3-201ENST00000579888 337 ntBASIC3.42□□□□□ -1.86
VTNP04004 MIR4425-201ENST00000580572 84 ntBASIC3.42□□□□□ -1.86
VTNP04004 VN1R79P-201ENST00000593540 513 ntBASIC3.42□□□□□ -1.86
VTNP04004 AC004223.4-201ENST00000612426 332 ntBASIC3.42□□□□□ -1.86
VTNP04004 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 AC092192.1-201ENST00000633154 1018 ntBASIC3.42□□□□□ -1.86
VTNP04004 MIR622-201ENST00000638396 96 ntBASIC3.42□□□□□ -1.86
VTNP04004 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VTNP04004 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VTNP04004 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.42□□□□□ -1.86
VTNP04004 MTCO1P23-201ENST00000415223 1526 ntBASIC3.41□□□□□ -1.86
VTNP04004 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VTNP04004 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VTNP04004 SNORA31-201ENST00000362607 130 ntBASIC3.41□□□□□ -1.86
VTNP04004 SNORA71.1-201ENST00000364523 117 ntBASIC3.41□□□□□ -1.86
VTNP04004 RNU6-335P-201ENST00000364563 113 ntBASIC3.41□□□□□ -1.86
VTNP04004 RNA5SP88-201ENST00000365560 109 ntBASIC3.41□□□□□ -1.86
VTNP04004 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
VTNP04004 MTND4LP20-201ENST00000402379 270 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms