Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6-730P-201ENST00000383954 104 ntBASIC2.5□□□□□ -2.01
APOEP02649 SNORA36C-201ENST00000384289 132 ntBASIC2.5□□□□□ -2.01
APOEP02649 SNORA1.3-201ENST00000384676 136 ntBASIC2.5□□□□□ -2.01
APOEP02649 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOEP02649 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
APOEP02649 HMGB3P31-201ENST00000413333 595 ntBASIC2.5□□□□□ -2.01
APOEP02649 AL158825.1-201ENST00000414735 521 ntBASIC2.5□□□□□ -2.01
APOEP02649 AL137014.1-201ENST00000420490 1226 ntBASIC2.5□□□□□ -2.01
APOEP02649 NANOGP5-201ENST00000424456 877 ntBASIC2.5□□□□□ -2.01
APOEP02649 RPP40P1-201ENST00000426762 456 ntBASIC2.5□□□□□ -2.01
APOEP02649 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.5□□□□□ -2.01
APOEP02649 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.5□□□□□ -2.01
APOEP02649 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.5□□□□□ -2.01
APOEP02649 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
APOEP02649 RBM43P1-201ENST00000476891 1081 ntBASIC2.5□□□□□ -2.01
APOEP02649 RPL36AP51-201ENST00000487216 318 ntBASIC2.5□□□□□ -2.01
APOEP02649 RN7SL636P-201ENST00000497504 294 ntBASIC2.5□□□□□ -2.01
APOEP02649 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.5□□□□□ -2.01
APOEP02649 AC010486.1-201ENST00000511793 424 ntBASIC2.5□□□□□ -2.01
APOEP02649 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.5□□□□□ -2.01
APOEP02649 AC109329.2-201ENST00000519658 482 ntBASIC2.5□□□□□ -2.01
APOEP02649 AP000867.2-201ENST00000532468 320 ntBASIC2.5□□□□□ -2.01
APOEP02649 AC004217.3-201ENST00000551552 878 ntBASIC2.5□□□□□ -2.01
APOEP02649 AC121758.2-201ENST00000553271 193 ntBASIC2.5□□□□□ -2.01
APOEP02649 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
APOEP02649 MIR4435-1-201ENST00000582552 80 ntBASIC2.5□□□□□ -2.01
APOEP02649 AC008739.2-201ENST00000597006 317 ntBASIC2.5□□□□□ -2.01
APOEP02649 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.5□□□□□ -2.01
APOEP02649 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
APOEP02649 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.5□□□□□ -2.01
APOEP02649 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
APOEP02649 ATP5F1P6-201ENST00000402768 767 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC096533.1-201ENST00000411645 353 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
APOEP02649 MTCO1P39-201ENST00000426148 480 ntBASIC2.49□□□□□ -2.01
APOEP02649 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
APOEP02649 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.49□□□□□ -2.01
APOEP02649 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.49□□□□□ -2.01
APOEP02649 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.49□□□□□ -2.01
APOEP02649 SETP11-201ENST00000473027 690 ntBASIC2.49□□□□□ -2.01
APOEP02649 HSPE1P6-201ENST00000479457 291 ntBASIC2.49□□□□□ -2.01
APOEP02649 OR9N1P-202ENST00000494289 481 ntBASIC2.49□□□□□ -2.01
APOEP02649 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
APOEP02649 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.49□□□□□ -2.01
APOEP02649 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.49□□□□□ -2.01
APOEP02649 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC007115.1-201ENST00000546853 234 ntBASIC2.49□□□□□ -2.01
APOEP02649 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.49□□□□□ -2.01
APOEP02649 MED28P6-201ENST00000558776 231 ntBASIC2.49□□□□□ -2.01
APOEP02649 AP005205.1-201ENST00000563503 508 ntBASIC2.49□□□□□ -2.01
APOEP02649 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC103810.6-201ENST00000606708 136 ntBASIC2.49□□□□□ -2.01
APOEP02649 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
APOEP02649 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.49□□□□□ -2.01
APOEP02649 AC009032.1-201ENST00000617574 431 ntBASIC2.49□□□□□ -2.01
APOEP02649 AL353748.2-201ENST00000622148 471 ntBASIC2.49□□□□□ -2.01
APOEP02649 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
APOEP02649 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
APOEP02649 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.48□□□□□ -2.01
APOEP02649 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 TAF9BP2-201ENST00000400856 499 ntBASIC2.48□□□□□ -2.01
APOEP02649 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 RPS15AP38-201ENST00000413110 372 ntBASIC2.48□□□□□ -2.01
APOEP02649 Z75741.2-201ENST00000417272 1167 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 Z93242.1-201ENST00000427102 353 ntBASIC2.48□□□□□ -2.01
APOEP02649 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.48□□□□□ -2.01
APOEP02649 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 HIGD1AP6-201ENST00000521833 279 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.48□□□□□ -2.01
APOEP02649 AC025281.1-201ENST00000567026 265 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC061975.8-201ENST00000587058 721 ntBASIC2.48□□□□□ -2.01
APOEP02649 DNAJC19P3-201ENST00000594491 331 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC016542.1-201ENST00000608259 493 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC245517.5-201ENST00000611529 162 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC025016.1-201ENST00000616746 682 ntBASIC2.48□□□□□ -2.01
APOEP02649 AC110079.1-202ENST00000635213 138 ntBASIC2.48□□□□□ -2.01
APOEP02649 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
APOEP02649 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
APOEP02649 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOEP02649 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.48□□□□□ -2.01
APOEP02649 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOEP02649 MTND5P31-201ENST00000419366 1374 ntBASIC2.48□□□□□ -2.01
APOEP02649 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
APOEP02649 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOEP02649 AC069528.2-201ENST00000624849 1991 ntBASIC2.47□□□□□ -2.01
APOEP02649 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOEP02649 RNU6-252P-201ENST00000363232 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms