Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 USP9YP7-201ENST00000436723 430 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 USP9YP32-201ENST00000452432 430 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 AC096992.1-201ENST00000459808 709 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 AC034222.1-201ENST00000494052 532 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 TMEM248P1-201ENST00000510579 951 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 RNU6-826P-201ENST00000516827 104 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.59□□□□□ -2.15
SPTA1P02549 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.59□□□□□ -2.15
SPTA1P02549 AL627309.6-201ENST00000606857 840 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 RNA5SP457-201ENST00000363657 124 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 RNU6-1105P-201ENST00000384774 107 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 AL121972.1-201ENST00000402023 252 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.59□□□□□ -2.16
SPTA1P02549 NEK4P1-201ENST00000433383 879 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.59□□□□□ -2.16
SPTA1P02549 AC108734.3-201ENST00000481241 1165 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.59□□□□□ -2.16
SPTA1P02549 PTP4A1P6-201ENST00000531034 478 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.16
SPTA1P02549 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPTA1P02549 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SPTA1P02549 NCSTNP1-201ENST00000406229 144 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.58□□□□□ -2.16
SPTA1P02549 RNU6-964P-201ENST00000516524 69 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC007687.1-201ENST00000602704 304 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AL356575.1-201ENST00000603008 283 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC013444.2-201ENST00000603317 787 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.58□□□□□ -2.16
SPTA1P02549 MTCO1P14-201ENST00000441695 1559 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SPTA1P02549 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SPTA1P02549 SSXP1-201ENST00000453640 473 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC079804.2-201ENST00000490376 200 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 OR8X1P-201ENST00000534542 869 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.58□□□□□ -2.16
SPTA1P02549 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.58□□□□□ -2.16
SPTA1P02549 AC103987.3-201ENST00000582071 292 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.58□□□□□ -2.16
SPTA1P02549 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.58□□□□□ -2.16
SPTA1P02549 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPTA1P02549 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
SPTA1P02549 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SPTA1P02549 RNY1P4-201ENST00000384595 115 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.57□□□□□ -2.16
SPTA1P02549 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 AC025033.1-201ENST00000463883 194 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.57□□□□□ -2.16
SPTA1P02549 RNU2-58P-201ENST00000516403 183 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 SNORA31.15-201ENST00000516771 132 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 AC104986.1-201ENST00000517978 436 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 FAM35CP-201ENST00000554755 2470 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.57□□□□□ -2.16
SPTA1P02549 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SPTA1P02549 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.57□□□□□ -2.16
SPTA1P02549 NDUFB4P9-201ENST00000511646 388 ntBASIC1.57□□□□□ -2.16
SPTA1P02549 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.57□□□□□ -2.16
SPTA1P02549 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.57□□□□□ -2.16
SPTA1P02549 AC244517.1-201ENST00000606030 2086 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 RNU4-51P-201ENST00000364206 140 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 SNORA70.7-201ENST00000384159 133 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 RNA5SP344-201ENST00000411081 104 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.56□□□□□ -2.16
SPTA1P02549 AL157827.1-201ENST00000447622 132 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.56□□□□□ -2.16
SPTA1P02549 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
SPTA1P02549 AC090751.1-201ENST00000566966 267 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC109446.2-201ENST00000567872 497 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.56□□□□□ -2.16
SPTA1P02549 AC017076.1-201ENST00000607613 578 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SPTA1P02549 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SPTA1P02549 DHFRP5-201ENST00000406944 564 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 RNU6-174P-201ENST00000410406 106 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.56□□□□□ -2.16
SPTA1P02549 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.56□□□□□ -2.16
SPTA1P02549 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.56□□□□□ -2.16
SPTA1P02549 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.56□□□□□ -2.16
SPTA1P02549 MTND1P18-201ENST00000448191 573 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.56□□□□□ -2.16
SPTA1P02549 AL121821.2-201ENST00000556081 394 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.56□□□□□ -2.16
SPTA1P02549 AC012150.2-201ENST00000621300 544 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC012640.5-201ENST00000623897 319 ntBASIC1.56□□□□□ -2.16
SPTA1P02549 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.56□□□□□ -2.16
SPTA1P02549 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SPTA1P02549 Y_RNA.433-201ENST00000384089 102 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 ARF4P2-201ENST00000430209 526 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AC005534.2-201ENST00000431047 433 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AL138787.1-202ENST00000437804 898 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AC090255.1-201ENST00000495779 349 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTA1P02549 CYP3A137P-201ENST00000562436 69 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.55□□□□□ -2.16
SPTA1P02549 AC012531.5-201ENST00000611375 151 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms