Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.55□□□□□ -2
POLR1AO95602 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
POLR1AO95602 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.55□□□□□ -2
POLR1AO95602 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
POLR1AO95602 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.55□□□□□ -2
POLR1AO95602 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
POLR1AO95602 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.54□□□□□ -2
POLR1AO95602 RNU6-53P-201ENST00000365367 106 ntBASIC2.54□□□□□ -2
POLR1AO95602 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
POLR1AO95602 RNU2-20P-201ENST00000410425 191 ntBASIC2.54□□□□□ -2
POLR1AO95602 AL121594.1-201ENST00000475906 575 ntBASIC2.54□□□□□ -2
POLR1AO95602 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 MTCYBP17-201ENST00000503579 789 ntBASIC2.54□□□□□ -2
POLR1AO95602 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.54□□□□□ -2
POLR1AO95602 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 APOOP1-201ENST00000604695 592 ntBASIC2.54□□□□□ -2
POLR1AO95602 MIR8081-201ENST00000611533 95 ntBASIC2.54□□□□□ -2
POLR1AO95602 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.54□□□□□ -2
POLR1AO95602 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
POLR1AO95602 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
POLR1AO95602 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.54□□□□□ -2
POLR1AO95602 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
POLR1AO95602 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 UBE2V2P1-201ENST00000434717 398 ntBASIC2.54□□□□□ -2
POLR1AO95602 RPS29P20-201ENST00000489592 171 ntBASIC2.54□□□□□ -2
POLR1AO95602 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.54□□□□□ -2
POLR1AO95602 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
POLR1AO95602 AC010928.2-201ENST00000588017 287 ntBASIC2.54□□□□□ -2
POLR1AO95602 MIR502-201ENST00000606349 86 ntBASIC2.54□□□□□ -2
POLR1AO95602 AL512598.1-201ENST00000610158 273 ntBASIC2.54□□□□□ -2
POLR1AO95602 AC110774.1-201ENST00000623567 2018 ntBASIC2.53□□□□□ -2
POLR1AO95602 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.53□□□□□ -2
POLR1AO95602 MIR613-201ENST00000385248 95 ntBASIC2.53□□□□□ -2
POLR1AO95602 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.53□□□□□ -2
POLR1AO95602 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.53□□□□□ -2
POLR1AO95602 SSXP9-201ENST00000417503 292 ntBASIC2.53□□□□□ -2
POLR1AO95602 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.53□□□□□ -2
POLR1AO95602 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.53□□□□□ -2
POLR1AO95602 RPS4XP11-201ENST00000446897 772 ntBASIC2.53□□□□□ -2
POLR1AO95602 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.53□□□□□ -2
POLR1AO95602 AP000790.1-201ENST00000528891 737 ntBASIC2.53□□□□□ -2
POLR1AO95602 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.53□□□□□ -2
POLR1AO95602 LINC00216-201ENST00000623548 1126 ntBASIC2.53□□□□□ -2
POLR1AO95602 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.53□□□□□ -2
POLR1AO95602 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
POLR1AO95602 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
POLR1AO95602 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR1AO95602 AC007256.1-201ENST00000392253 2765 ntBASIC2.52□□□□□ -2.01
POLR1AO95602 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR1AO95602 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR1AO95602 PSMA2P3-201ENST00000429685 675 ntBASIC2.52□□□□□ -2.01
POLR1AO95602 RNU1-123P-201ENST00000458950 160 ntBASIC2.52□□□□□ -2.01
POLR1AO95602 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1AO95602 ACTR3BP3-201ENST00000565577 979 ntBASIC2.52□□□□□ -2.01
POLR1AO95602 MIR591-201ENST00000385290 95 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 PPP1R2P5-201ENST00000457256 603 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1AO95602 AC087441.2-201ENST00000529141 262 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1AO95602 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1AO95602 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1AO95602 AC019159.1-201ENST00000605094 187 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
POLR1AO95602 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1AO95602 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1AO95602 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1AO95602 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1AO95602 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1AO95602 AC108734.3-201ENST00000481241 1165 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1AO95602 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
POLR1AO95602 SETP2-201ENST00000553886 926 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1AO95602 MIR4419B-201ENST00000577260 68 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 MIR4452-201ENST00000583004 71 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AP001029.3-201ENST00000588063 596 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AL645939.4-201ENST00000604495 135 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AC007620.3-201ENST00000608131 497 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 DUXAP9-208ENST00000622815 614 ntBASIC2.51□□□□□ -2.01
POLR1AO95602 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1AO95602 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1AO95602 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1AO95602 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1AO95602 RN7SKP101-201ENST00000411376 320 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 TOMM22P1-201ENST00000418578 312 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1AO95602 RNA5SP102-201ENST00000516865 106 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 NOP56P3-201ENST00000549457 385 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1AO95602 AC104581.2-201ENST00000572227 430 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1AO95602 RN7SL622P-201ENST00000585292 275 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1AO95602 RMST_6.1-201ENST00000611980 203 ntBASIC2.5□□□□□ -2.01
POLR1AO95602 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
POLR1AO95602 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1AO95602 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1AO95602 SSXP1-201ENST00000453640 473 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms