Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.98□□□□□ -1.93
NPHP4O75161 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AC104986.1-201ENST00000517978 436 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP4O75161 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP4O75161 AC011611.5-201ENST00000552477 578 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP4O75161 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.98□□□□□ -1.93
NPHP4O75161 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP4O75161 AC108479.2-201ENST00000617314 601 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
NPHP4O75161 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NPHP4O75161 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPHP4O75161 RNU6-661P-201ENST00000362409 107 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 RNU6-543P-201ENST00000362576 108 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 MTND4LP14-201ENST00000429447 288 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP4O75161 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHP4O75161 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP4O75161 SNRPGP9-201ENST00000456025 225 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP4O75161 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHP4O75161 AP003467.2-201ENST00000520175 319 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 AC034268.2-201ENST00000571784 482 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.97□□□□□ -1.93
NPHP4O75161 AC091488.1-201ENST00000604239 660 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 YWHAEP7-203ENST00000622054 312 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 FAM157B-203ENST00000639350 358 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 MTND4P8-201ENST00000514997 1362 ntBASIC2.97□□□□□ -1.93
NPHP4O75161 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHP4O75161 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
NPHP4O75161 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHP4O75161 FRG1BP-201ENST00000278882 761 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 OR5T3-201ENST00000303059 1023 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 SNORD51.1-201ENST00000365405 77 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 SNORA48.3-201ENST00000391081 134 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 PSMA2P3-201ENST00000429685 675 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 NEK4P1-201ENST00000433383 879 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 SETP8-201ENST00000435341 628 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.96□□□□□ -1.94
NPHP4O75161 MTCO1P42-201ENST00000457379 726 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.96□□□□□ -1.94
NPHP4O75161 AC026412.2-201ENST00000512270 1075 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHP4O75161 RNA5SP182-201ENST00000516064 82 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 RN7SKP96-201ENST00000516948 297 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHP4O75161 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHP4O75161 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.96□□□□□ -1.94
NPHP4O75161 MIR3670-2-201ENST00000582974 65 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 MIR3670-1-201ENST00000584160 65 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 MIR3670-3-201ENST00000584855 65 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 TPMTP1-201ENST00000592307 737 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 RNA5SP108-201ENST00000605921 117 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 AC004775.1-201ENST00000607389 753 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 MIR3670-4-201ENST00000612260 65 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.96□□□□□ -1.94
NPHP4O75161 AC010297.1-201ENST00000623948 149 ntBASIC2.96□□□□□ -1.94
NPHP4O75161 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
NPHP4O75161 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPHP4O75161 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPHP4O75161 U8.10-201ENST00000384260 133 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 BTBD10P2-201ENST00000404779 676 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 HMGB1P11-201ENST00000413899 637 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.95□□□□□ -1.94
NPHP4O75161 NDUFA5P4-201ENST00000436704 385 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 UBE2V1P5-201ENST00000440070 405 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AC068135.1-201ENST00000446164 246 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.95□□□□□ -1.94
NPHP4O75161 CABYRP1-201ENST00000465493 1045 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NPHP4O75161 AC016065.2-201ENST00000514530 444 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AC025881.1-201ENST00000518851 512 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.95□□□□□ -1.94
NPHP4O75161 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.95□□□□□ -1.94
NPHP4O75161 AC091834.1-201ENST00000614543 472 ntBASIC2.95□□□□□ -1.94
NPHP4O75161 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.95□□□□□ -1.94
NPHP4O75161 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPHP4O75161 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP4O75161 AL354719.1-201ENST00000406535 843 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 EI24P1-201ENST00000416584 867 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 CR848007.2-201ENST00000424918 787 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.94□□□□□ -1.94
NPHP4O75161 AC004865.1-201ENST00000442276 1003 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 AL118520.1-201ENST00000450770 291 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHP4O75161 snoZ278.1-201ENST00000517059 112 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.94□□□□□ -1.94
NPHP4O75161 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.94□□□□□ -1.94
NPHP4O75161 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.94□□□□□ -1.94
NPHP4O75161 ZNF192P1-203ENST00000565888 810 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 AC131902.3-201ENST00000611767 581 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP4O75161 MIR4496-201ENST00000635896 61 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms