Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
SHOX2O60902 TMSB4XP1-201ENST00000424567 135 ntBASIC2.58□□□□□ -2
SHOX2O60902 AL645638.1-201ENST00000440519 361 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.58□□□□□ -2
SHOX2O60902 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.58□□□□□ -2
SHOX2O60902 RPS29P12-201ENST00000460178 152 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC080014.1-201ENST00000496877 1201 ntBASIC2.58□□□□□ -2
SHOX2O60902 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.58□□□□□ -2
SHOX2O60902 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.58□□□□□ -2
SHOX2O60902 RNU6-416P-201ENST00000516265 103 ntBASIC2.58□□□□□ -2
SHOX2O60902 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC104229.1-201ENST00000561364 255 ntBASIC2.58□□□□□ -2
SHOX2O60902 ACTR3BP3-201ENST00000565577 979 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC090666.1-201ENST00000578241 445 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.58□□□□□ -2
SHOX2O60902 AC024153.1-201ENST00000603103 365 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC124312.4-201ENST00000605533 310 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC106028.5-201ENST00000610332 395 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC009318.4-201ENST00000620496 486 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC007275.1-201ENST00000621243 671 ntBASIC2.58□□□□□ -2
SHOX2O60902 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHOX2O60902 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
SHOX2O60902 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.57□□□□□ -2
SHOX2O60902 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
SHOX2O60902 AL592148.1-201ENST00000413568 445 ntBASIC2.57□□□□□ -2
SHOX2O60902 Z93242.1-201ENST00000427102 353 ntBASIC2.57□□□□□ -2
SHOX2O60902 AL590762.3-201ENST00000436372 640 ntBASIC2.57□□□□□ -2
SHOX2O60902 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
SHOX2O60902 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.57□□□□□ -2
SHOX2O60902 RPL23AP16-201ENST00000441715 421 ntBASIC2.57□□□□□ -2
SHOX2O60902 AC025750.2-201ENST00000442609 450 ntBASIC2.57□□□□□ -2
SHOX2O60902 snoU109.4-201ENST00000458953 143 ntBASIC2.57□□□□□ -2
SHOX2O60902 PRELID3BP4-201ENST00000515476 571 ntBASIC2.57□□□□□ -2
SHOX2O60902 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
SHOX2O60902 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.57□□□□□ -2
SHOX2O60902 CKS1BP7-201ENST00000522230 235 ntBASIC2.57□□□□□ -2
SHOX2O60902 HMGB1P1-201ENST00000522557 636 ntBASIC2.57□□□□□ -2
SHOX2O60902 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
SHOX2O60902 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.57□□□□□ -2
SHOX2O60902 AC006539.2-201ENST00000601729 572 ntBASIC2.57□□□□□ -2
SHOX2O60902 KATNBL1P5-201ENST00000605015 517 ntBASIC2.57□□□□□ -2
SHOX2O60902 AL450270.1-201ENST00000606160 391 ntBASIC2.57□□□□□ -2
SHOX2O60902 AC100814.1-201ENST00000606963 623 ntBASIC2.57□□□□□ -2
SHOX2O60902 AC008083.4-201ENST00000615076 444 ntBASIC2.57□□□□□ -2
SHOX2O60902 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
SHOX2O60902 AC040168.1-201ENST00000623594 991 ntBASIC2.57□□□□□ -2
SHOX2O60902 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.57□□□□□ -2
SHOX2O60902 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHOX2O60902 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.57□□□□□ -2
SHOX2O60902 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.56□□□□□ -2
SHOX2O60902 MIR422A-201ENST00000362286 90 ntBASIC2.56□□□□□ -2
SHOX2O60902 RNU6-173P-201ENST00000364215 104 ntBASIC2.56□□□□□ -2
SHOX2O60902 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.56□□□□□ -2
SHOX2O60902 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.56□□□□□ -2
SHOX2O60902 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 VN1R42P-201ENST00000424651 344 ntBASIC2.56□□□□□ -2
SHOX2O60902 WARS2P1-201ENST00000429678 537 ntBASIC2.56□□□□□ -2
SHOX2O60902 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.56□□□□□ -2
SHOX2O60902 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 Z96811.1-201ENST00000445880 108 ntBASIC2.56□□□□□ -2
SHOX2O60902 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
SHOX2O60902 PABPC1P3-201ENST00000469174 459 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC108729.2-201ENST00000476543 840 ntBASIC2.56□□□□□ -2
SHOX2O60902 RPS29P26-201ENST00000477483 171 ntBASIC2.56□□□□□ -2
SHOX2O60902 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.56□□□□□ -2
SHOX2O60902 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
SHOX2O60902 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
SHOX2O60902 ARL2BPP5-201ENST00000523141 481 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 OR10V3P-201ENST00000525712 725 ntBASIC2.56□□□□□ -2
SHOX2O60902 AP000790.1-201ENST00000528891 737 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC007115.1-201ENST00000546853 234 ntBASIC2.56□□□□□ -2
SHOX2O60902 EEF1B2P4-201ENST00000551398 348 ntBASIC2.56□□□□□ -2
SHOX2O60902 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.56□□□□□ -2
SHOX2O60902 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.56□□□□□ -2
SHOX2O60902 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.56□□□□□ -2
SHOX2O60902 AC023824.3-201ENST00000569003 562 ntBASIC2.56□□□□□ -2
SHOX2O60902 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
SHOX2O60902 FAM60BP-201ENST00000578364 658 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC040174.2-201ENST00000602701 465 ntBASIC2.56□□□□□ -2
SHOX2O60902 NUTF2P8-201ENST00000604593 363 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC010738.1-201ENST00000604970 987 ntBASIC2.56□□□□□ -2
SHOX2O60902 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
SHOX2O60902 AC008432.1-201ENST00000615912 1320 ntBASIC2.56□□□□□ -2
SHOX2O60902 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SHOX2O60902 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
SHOX2O60902 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.56□□□□□ -2
SHOX2O60902 FAM133CP-201ENST00000332869 704 ntBASIC2.55□□□□□ -2
SHOX2O60902 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHOX2O60902 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
SHOX2O60902 SNORD82-201ENST00000365530 70 ntBASIC2.55□□□□□ -2
SHOX2O60902 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.55□□□□□ -2
SHOX2O60902 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHOX2O60902 MIR16-1-201ENST00000385271 89 ntBASIC2.55□□□□□ -2
SHOX2O60902 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.55□□□□□ -2
SHOX2O60902 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms