Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
SNX3O60493 MIR7844-201ENST00000616161 122 ntBASIC3.27□□□□□ -1.89
SNX3O60493 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.27□□□□□ -1.89
SNX3O60493 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
SNX3O60493 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 MTCO1P9-201ENST00000505577 1534 ntBASIC3.27□□□□□ -1.89
SNX3O60493 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX3O60493 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SNX3O60493 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.27□□□□□ -1.89
SNX3O60493 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
SNX3O60493 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SNX3O60493 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SNX3O60493 CCT4P2-201ENST00000233836 1548 ntBASIC3.26□□□□□ -1.89
SNX3O60493 SNORD9-201ENST00000362566 104 ntBASIC3.26□□□□□ -1.89
SNX3O60493 RNU6-1078P-201ENST00000364522 103 ntBASIC3.26□□□□□ -1.89
SNX3O60493 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNX3O60493 U3.20-201ENST00000390909 217 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL022722.2-201ENST00000402519 180 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL136372.1-201ENST00000403060 228 ntBASIC3.26□□□□□ -1.89
SNX3O60493 RNA5SP129-201ENST00000410276 118 ntBASIC3.26□□□□□ -1.89
SNX3O60493 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC109780.2-201ENST00000413467 845 ntBASIC3.26□□□□□ -1.89
SNX3O60493 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 OR8F1P-201ENST00000425243 930 ntBASIC3.26□□□□□ -1.89
SNX3O60493 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNX3O60493 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX3O60493 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 AL365184.2-201ENST00000431139 435 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC004866.2-201ENST00000438285 481 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL512286.1-201ENST00000439244 400 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL662791.1-201ENST00000441992 928 ntBASIC3.26□□□□□ -1.89
SNX3O60493 RPL7P36-201ENST00000444633 681 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL162151.2-201ENST00000448875 158 ntBASIC3.26□□□□□ -1.89
SNX3O60493 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 HMGN2P16-201ENST00000456802 261 ntBASIC3.26□□□□□ -1.89
SNX3O60493 U3.44-201ENST00000458938 192 ntBASIC3.26□□□□□ -1.89
SNX3O60493 TMED11P-201ENST00000479478 690 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.26□□□□□ -1.89
SNX3O60493 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX3O60493 AC125611.2-201ENST00000551907 647 ntBASIC3.26□□□□□ -1.89
SNX3O60493 PCMTD1P2-201ENST00000565017 355 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC112187.2-201ENST00000604345 283 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL451086.1-201ENST00000605596 223 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC012443.1-201ENST00000605605 231 ntBASIC3.26□□□□□ -1.89
SNX3O60493 uc_338.1-201ENST00000612113 180 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL392048.1-201ENST00000613946 534 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AL450472.3-201ENST00000615578 367 ntBASIC3.26□□□□□ -1.89
SNX3O60493 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SNX3O60493 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC095031.1-201ENST00000623685 672 ntBASIC3.26□□□□□ -1.89
SNX3O60493 AC127502.3-201ENST00000636170 1206 ntBASIC3.26□□□□□ -1.89
SNX3O60493 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX3O60493 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX3O60493 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
SNX3O60493 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SNX3O60493 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX3O60493 AL513185.3-201ENST00000433335 1300 ntBASIC3.25□□□□□ -1.89
SNX3O60493 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SNX3O60493 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX3O60493 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX3O60493 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RNU6-501P-201ENST00000364072 100 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RNU6-173P-201ENST00000364215 104 ntBASIC3.25□□□□□ -1.89
SNX3O60493 DEFB109C-201ENST00000382575 264 ntBASIC3.25□□□□□ -1.89
SNX3O60493 DEFB109B-201ENST00000382656 264 ntBASIC3.25□□□□□ -1.89
SNX3O60493 U8.14-201ENST00000390843 143 ntBASIC3.25□□□□□ -1.89
SNX3O60493 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RN7SKP58-201ENST00000411010 305 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AL359704.1-201ENST00000411586 781 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RPS27AP14-201ENST00000422868 454 ntBASIC3.25□□□□□ -1.89
SNX3O60493 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX3O60493 UBE2V1P13-201ENST00000436983 439 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RABEPKP1-201ENST00000440529 1026 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AL121871.1-201ENST00000443413 436 ntBASIC3.25□□□□□ -1.89
SNX3O60493 GDI2P2-201ENST00000445131 608 ntBASIC3.25□□□□□ -1.89
SNX3O60493 EPS15P1-201ENST00000448836 336 ntBASIC3.25□□□□□ -1.89
SNX3O60493 KATNBL1P6-201ENST00000453433 915 ntBASIC3.25□□□□□ -1.89
SNX3O60493 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 MTND3P7-201ENST00000474435 343 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX3O60493 MTCO2P32-201ENST00000514865 403 ntBASIC3.25□□□□□ -1.89
SNX3O60493 RAB9BP1-201ENST00000519581 626 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX3O60493 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX3O60493 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 AC005476.1-201ENST00000554427 397 ntBASIC3.25□□□□□ -1.89
SNX3O60493 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 MED28P6-201ENST00000558776 231 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX3O60493 ROCK1P1-201ENST00000573767 549 ntBASIC3.25□□□□□ -1.89
SNX3O60493 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms