Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC024560.2-201ENST00000507981 1497 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AL353746.1-201ENST00000566293 6881 ntBASIC3.41□□□□□ -1.86
SSX4O60224 MTND4P4-201ENST00000439033 1366 ntBASIC3.41□□□□□ -1.86
SSX4O60224 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 MIR30B-201ENST00000384850 88 ntBASIC3.41□□□□□ -1.86
SSX4O60224 CCNG1P1-201ENST00000406783 885 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RPS3AP24-201ENST00000407896 734 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RN7SKP285-201ENST00000410137 318 ntBASIC3.41□□□□□ -1.86
SSX4O60224 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RNU2-71P-201ENST00000411395 189 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RPL17P12-201ENST00000413391 526 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 AC098826.1-201ENST00000433943 471 ntBASIC3.41□□□□□ -1.86
SSX4O60224 TBCAP1-201ENST00000436520 327 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AC073387.1-201ENST00000453261 709 ntBASIC3.41□□□□□ -1.86
SSX4O60224 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 OR9M1P-201ENST00000459641 921 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RPL23AP14-201ENST00000468281 468 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AL049830.2-201ENST00000480072 201 ntBASIC3.41□□□□□ -1.86
SSX4O60224 ACTR3P3-201ENST00000480448 893 ntBASIC3.41□□□□□ -1.86
SSX4O60224 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 AC117532.1-201ENST00000514638 323 ntBASIC3.41□□□□□ -1.86
SSX4O60224 RNU6-1003P-201ENST00000517099 105 ntBASIC3.41□□□□□ -1.86
SSX4O60224 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SSX4O60224 AC125611.2-201ENST00000551907 647 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
SSX4O60224 MIR5697-201ENST00000578045 78 ntBASIC3.41□□□□□ -1.86
SSX4O60224 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 MIR3944-201ENST00000581277 108 ntBASIC3.41□□□□□ -1.86
SSX4O60224 MIR548AB-201ENST00000584917 84 ntBASIC3.41□□□□□ -1.86
SSX4O60224 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSX4O60224 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
SSX4O60224 MIR6130-201ENST00000619419 109 ntBASIC3.41□□□□□ -1.86
SSX4O60224 Z69908.1-201ENST00000622603 247 ntBASIC3.41□□□□□ -1.86
SSX4O60224 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSX4O60224 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
SSX4O60224 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.41□□□□□ -1.86
SSX4O60224 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
SSX4O60224 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SSX4O60224 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SSX4O60224 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.4□□□□□ -1.86
SSX4O60224 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSX4O60224 Y_RNA.46-201ENST00000362695 102 ntBASIC3.4□□□□□ -1.87
SSX4O60224 U3.4-201ENST00000363352 213 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RNU6-173P-201ENST00000364215 104 ntBASIC3.4□□□□□ -1.87
SSX4O60224 SNORD116-9-201ENST00000384000 95 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RNU6-533P-201ENST00000384144 107 ntBASIC3.4□□□□□ -1.87
SSX4O60224 SNORD116-3-201ENST00000384287 95 ntBASIC3.4□□□□□ -1.87
SSX4O60224 SNORD116-7-201ENST00000384404 95 ntBASIC3.4□□□□□ -1.87
SSX4O60224 SNORD116-5-201ENST00000384462 95 ntBASIC3.4□□□□□ -1.87
SSX4O60224 HLFP1-201ENST00000402375 499 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RPS20P2-201ENST00000402520 389 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC078974.1-201ENST00000411597 223 ntBASIC3.4□□□□□ -1.87
SSX4O60224 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSX4O60224 YME1L1P1-201ENST00000429435 297 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AL358472.1-201ENST00000431295 329 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 AC004866.2-201ENST00000438285 481 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX4O60224 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX4O60224 AC009961.3-201ENST00000449832 765 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RPS11P1-201ENST00000451072 473 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RPL23AP31-201ENST00000456160 467 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RPL7P15-201ENST00000461190 712 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RPS3AP50-201ENST00000487064 803 ntBASIC3.4□□□□□ -1.87
SSX4O60224 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC080014.1-201ENST00000496877 1201 ntBASIC3.4□□□□□ -1.87
SSX4O60224 ARL2BPP6-201ENST00000512757 439 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
SSX4O60224 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 RNU6-798P-201ENST00000516912 103 ntBASIC3.4□□□□□ -1.87
SSX4O60224 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX4O60224 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 AL133271.1-201ENST00000538229 291 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC012414.6-201ENST00000568241 401 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX4O60224 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX4O60224 AP005136.1-201ENST00000579765 429 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX4O60224 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX4O60224 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX4O60224 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX4O60224 AC015726.1-201ENST00000602353 681 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC012443.1-201ENST00000605605 231 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.4□□□□□ -1.87
SSX4O60224 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 AC104010.1-201ENST00000616889 150 ntBASIC3.4□□□□□ -1.87
SSX4O60224 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC243312.2-201ENST00000623340 601 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC112204.3-201ENST00000623822 332 ntBASIC3.4□□□□□ -1.87
SSX4O60224 AC244258.1-201ENST00000637553 1071 ntBASIC3.4□□□□□ -1.87
SSX4O60224 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms