Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR6503-201ENST00000622884 86 ntBASIC9.31□□□□□ -0.92
MSH5O43196 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 MAPK10-344ENST00000641718 3746 ntBASIC9.31□□□□□ -0.92
MSH5O43196 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC9.31□□□□□ -0.92
MSH5O43196 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MSH5O43196 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.31□□□□□ -0.92
MSH5O43196 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC9.3□□□□□ -0.92
MSH5O43196 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
MSH5O43196 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MSH5O43196 RNU5A-1-201ENST00000362698 116 ntBASIC9.3□□□□□ -0.92
MSH5O43196 RNU6-727P-201ENST00000363592 107 ntBASIC9.3□□□□□ -0.92
MSH5O43196 RN7SKP55-201ENST00000364888 307 ntBASIC9.3□□□□□ -0.92
MSH5O43196 RNU6-487P-201ENST00000365430 104 ntBASIC9.3□□□□□ -0.92
MSH5O43196 AL353133.1-201ENST00000407695 401 ntBASIC9.3□□□□□ -0.92
MSH5O43196 Y_RNA.601-201ENST00000410500 113 ntBASIC9.3□□□□□ -0.92
MSH5O43196 RNA5SP155-201ENST00000411154 129 ntBASIC9.3□□□□□ -0.92
MSH5O43196 BTF3P4-201ENST00000418852 495 ntBASIC9.3□□□□□ -0.92
MSH5O43196 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 MIR6806-201ENST00000622141 64 ntBASIC9.3□□□□□ -0.92
MSH5O43196 AC008626.2-201ENST00000624425 248 ntBASIC9.3□□□□□ -0.92
MSH5O43196 SNORA43.4-201ENST00000629559 138 ntBASIC9.3□□□□□ -0.92
MSH5O43196 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 AC004014.2-201ENST00000623718 5122 ntBASIC9.3□□□□□ -0.92
MSH5O43196 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MSH5O43196 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
MSH5O43196 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MSH5O43196 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MSH5O43196 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MSH5O43196 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC9.29□□□□□ -0.92
MSH5O43196 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC9.29□□□□□ -0.92
MSH5O43196 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 AC123769.2-201ENST00000624332 5984 ntBASIC9.29□□□□□ -0.92
MSH5O43196 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
MSH5O43196 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
MSH5O43196 RNA5SP232-201ENST00000364144 119 ntBASIC9.29□□□□□ -0.92
MSH5O43196 Y_RNA.213-201ENST00000364178 111 ntBASIC9.29□□□□□ -0.92
MSH5O43196 RNU1-24P-201ENST00000364285 165 ntBASIC9.29□□□□□ -0.92
MSH5O43196 CRP-203ENST00000368111 512 ntTSL 3 BASIC9.29□□□□□ -0.92
MSH5O43196 CRP-204ENST00000368112 787 ntTSL 2 BASIC9.29□□□□□ -0.92
MSH5O43196 RNU6-225P-201ENST00000384613 103 ntBASIC9.29□□□□□ -0.92
MSH5O43196 SNORA3.1-201ENST00000408166 111 ntBASIC9.29□□□□□ -0.92
MSH5O43196 RN7SKP207-201ENST00000411204 303 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC245291.3-201ENST00000443400 292 ntBASIC9.29□□□□□ -0.92
MSH5O43196 RPL39P25-201ENST00000449384 154 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC104339.1-201ENST00000465478 348 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC114324.2-202ENST00000503812 134 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC9.29□□□□□ -0.92
MSH5O43196 AL031846.1-201ENST00000560933 314 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC010463.3-201ENST00000594077 500 ntBASIC9.29□□□□□ -0.92
MSH5O43196 AC127024.6-201ENST00000621598 424 ntBASIC9.29□□□□□ -0.92
MSH5O43196 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC9.29□□□□□ -0.92
MSH5O43196 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC9.29□□□□□ -0.92
MSH5O43196 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 AC129502.1-201ENST00000623261 1654 ntBASIC9.29□□□□□ -0.92
MSH5O43196 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
MSH5O43196 AC006206.1-201ENST00000544842 3387 ntBASIC9.29□□□□□ -0.92
MSH5O43196 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
MSH5O43196 AL139384.2-201ENST00000613809 3590 ntBASIC9.28□□□□□ -0.92
MSH5O43196 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 AL356292.1-201ENST00000283110 373 ntBASIC9.28□□□□□ -0.92
MSH5O43196 RNU6-527P-201ENST00000363425 104 ntBASIC9.28□□□□□ -0.92
MSH5O43196 RNU1-65P-201ENST00000363919 148 ntBASIC9.28□□□□□ -0.92
MSH5O43196 RNA5SP279-201ENST00000365513 117 ntBASIC9.28□□□□□ -0.92
MSH5O43196 MIR548A2-201ENST00000384956 97 ntBASIC9.28□□□□□ -0.92
MSH5O43196 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 AL691449.1-201ENST00000426570 421 ntBASIC9.28□□□□□ -0.92
MSH5O43196 LINC02210-201ENST00000444561 288 ntBASIC9.28□□□□□ -0.92
MSH5O43196 SS18L2P1-201ENST00000445923 213 ntBASIC9.28□□□□□ -0.92
MSH5O43196 SCARNA20.1-201ENST00000516009 138 ntBASIC9.28□□□□□ -0.92
MSH5O43196 RNU6-795P-201ENST00000516323 103 ntBASIC9.28□□□□□ -0.92
MSH5O43196 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC9.28□□□□□ -0.92
MSH5O43196 MIR378C-201ENST00000578683 81 ntBASIC9.28□□□□□ -0.92
MSH5O43196 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC9.28□□□□□ -0.92
MSH5O43196 MIR4732-201ENST00000581873 76 ntBASIC9.28□□□□□ -0.92
MSH5O43196 MIR4668-201ENST00000582284 70 ntBASIC9.28□□□□□ -0.92
MSH5O43196 MIR4712-201ENST00000583750 82 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms