Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 RPS3AP43-201ENST00000479743 781 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 RNU6-1261P-201ENST00000517194 104 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM1O15116 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 PSMA2P1-201ENST00000526365 646 ntBASIC2.78□□□□□ -1.96
LSM1O15116 DEFB108D-201ENST00000527787 222 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AP000857.1-201ENST00000532151 543 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC128657.1-201ENST00000549459 145 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM1O15116 MIR3921-201ENST00000577308 85 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC011260.1-201ENST00000578420 472 ntBASIC2.78□□□□□ -1.96
LSM1O15116 MIR4429-201ENST00000580105 73 ntBASIC2.78□□□□□ -1.96
LSM1O15116 MIR3609-201ENST00000582661 80 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC105224.1-201ENST00000587055 421 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 AC024560.3-201ENST00000608482 349 ntBASIC2.78□□□□□ -1.96
LSM1O15116 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM1O15116 AP002826.1-201ENST00000608835 315 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC012314.7-201ENST00000619693 93 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
LSM1O15116 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM1O15116 MKKS-204ENST00000639674 192 ntBASIC2.78□□□□□ -1.96
LSM1O15116 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LSM1O15116 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.78□□□□□ -1.97
LSM1O15116 AC008568.2-201ENST00000623862 2313 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC099654.7-201ENST00000635788 2127 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
LSM1O15116 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LSM1O15116 RNU6-236P-201ENST00000363886 106 ntBASIC2.77□□□□□ -1.97
LSM1O15116 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
LSM1O15116 MIR670-201ENST00000390142 98 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RNU6-1197P-201ENST00000391183 107 ntBASIC2.77□□□□□ -1.97
LSM1O15116 ANAPC10P1-201ENST00000395991 556 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AL450338.1-201ENST00000407987 512 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.77□□□□□ -1.97
LSM1O15116 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM1O15116 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.77□□□□□ -1.97
LSM1O15116 YME1L1P1-201ENST00000429435 297 ntBASIC2.77□□□□□ -1.97
LSM1O15116 MTND2P5-201ENST00000432656 1006 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RPL26P6-201ENST00000440913 438 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RPL27AP5-201ENST00000469428 449 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RPL37P25-201ENST00000507308 276 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC113420.1-201ENST00000507903 571 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC010460.2-201ENST00000509054 677 ntBASIC2.77□□□□□ -1.97
LSM1O15116 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.77□□□□□ -1.97
LSM1O15116 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RPPH1-2P-201ENST00000516688 293 ntBASIC2.77□□□□□ -1.97
LSM1O15116 HMGB1P41-201ENST00000520234 440 ntBASIC2.77□□□□□ -1.97
LSM1O15116 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM1O15116 AC087272.1-201ENST00000523624 533 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM1O15116 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM1O15116 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM1O15116 AC008739.2-201ENST00000597006 317 ntBASIC2.77□□□□□ -1.97
LSM1O15116 BNIP3P11-201ENST00000603878 563 ntBASIC2.77□□□□□ -1.97
LSM1O15116 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC004009.2-201ENST00000623016 728 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC103798.2-201ENST00000624292 632 ntBASIC2.77□□□□□ -1.97
LSM1O15116 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.77□□□□□ -1.97
LSM1O15116 AC087821.2-201ENST00000637086 450 ntBASIC2.77□□□□□ -1.97
LSM1O15116 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM1O15116 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM1O15116 AP000526.1-201ENST00000603308 1388 ntBASIC2.76□□□□□ -1.97
LSM1O15116 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM1O15116 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM1O15116 RNU2-43P-201ENST00000410306 190 ntBASIC2.76□□□□□ -1.97
LSM1O15116 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LSM1O15116 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM1O15116 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM1O15116 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM1O15116 RPL23AP74-201ENST00000437246 471 ntBASIC2.76□□□□□ -1.97
LSM1O15116 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM1O15116 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM1O15116 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.76□□□□□ -1.97
LSM1O15116 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM1O15116 AC104164.3-201ENST00000467363 1258 ntBASIC2.76□□□□□ -1.97
LSM1O15116 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LSM1O15116 AL358832.1-201ENST00000497800 389 ntBASIC2.76□□□□□ -1.97
LSM1O15116 AC074250.1-201ENST00000511117 192 ntBASIC2.76□□□□□ -1.97
LSM1O15116 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM1O15116 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM1O15116 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM1O15116 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM1O15116 HMGB1P6-201ENST00000569046 646 ntBASIC2.76□□□□□ -1.97
LSM1O15116 VN1R87P-201ENST00000596706 487 ntBASIC2.76□□□□□ -1.97
LSM1O15116 AC010620.2-201ENST00000600135 313 ntBASIC2.76□□□□□ -1.97
LSM1O15116 YPEL5P2-201ENST00000605553 359 ntBASIC2.76□□□□□ -1.97
LSM1O15116 AC008759.3-201ENST00000613300 508 ntBASIC2.76□□□□□ -1.97
LSM1O15116 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM1O15116 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM1O15116 MTND5P1-201ENST00000445440 1375 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
LSM1O15116 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM1O15116 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM1O15116 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LSM1O15116 SNORD65.1-201ENST00000390889 71 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms