Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC245389.1-201ENST00000605141 529 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC012603.1-201ENST00000606424 528 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM38O00635 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AL021997.2-201ENST00000615674 271 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 CR381653.2-201ENST00000624041 768 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM38O00635 MIR3688-2-201ENST00000636963 87 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 MAPK10-253ENST00000641010 4072 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM38O00635 AC009902.3-201ENST00000606235 2172 ntBASIC4.21□□□□□ -1.73
TRIM38O00635 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM38O00635 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM38O00635 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
TRIM38O00635 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM38O00635 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM38O00635 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM38O00635 RNU1-14P-201ENST00000362759 152 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 RN7SKP226-201ENST00000364912 300 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM38O00635 MIR181A1-201ENST00000385026 110 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM38O00635 RNA5SP239-201ENST00000410218 129 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 RNA5SP306-201ENST00000411087 107 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM38O00635 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM38O00635 BEND7P1-201ENST00000422058 457 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 COX6B1P7-201ENST00000430845 235 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM38O00635 MTND1P28-201ENST00000435623 950 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 UBE2V1P13-201ENST00000436983 439 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 GDI2P2-201ENST00000445131 608 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 COX6CP12-201ENST00000446748 202 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 RPL35AP15-201ENST00000468042 339 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 RPL23AP2-201ENST00000471227 466 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AP000852.1-201ENST00000472460 573 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 RPL9P6-201ENST00000492764 598 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 ARL2BPP6-201ENST00000512757 439 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 AC023632.4-201ENST00000517783 191 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 AC123904.3-201ENST00000547218 814 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC124947.2-202ENST00000552735 133 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 MIR4528-201ENST00000577763 90 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM38O00635 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC090578.1-201ENST00000604955 591 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 PART1_1.1-201ENST00000611761 217 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AL136221.1-201ENST00000621449 509 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AC103858.2-201ENST00000621471 543 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 AP002001.2-201ENST00000529025 1469 ntBASIC4.21□□□□□ -1.74
TRIM38O00635 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TRIM38O00635 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM38O00635 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM38O00635 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TRIM38O00635 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM38O00635 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM38O00635 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM38O00635 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM38O00635 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM38O00635 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 FRG1BP-201ENST00000278882 761 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 CBX3P1-201ENST00000325243 554 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 Y_RNA.38-201ENST00000362617 102 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RNA5SP175-201ENST00000364275 119 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RNA5SP130-201ENST00000364431 114 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RNA5SP513-201ENST00000364648 118 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRIM38O00635 Y_RNA.509-201ENST00000384506 99 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RNU2-47P-201ENST00000410649 186 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.2□□□□□ -1.74
TRIM38O00635 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM38O00635 RPL21P32-201ENST00000419877 477 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 RPL21P112-201ENST00000434403 463 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM38O00635 AL121871.1-201ENST00000443413 436 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM38O00635 Z99127.3-201ENST00000448158 395 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AL162151.2-201ENST00000448875 158 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 RPS24P6-201ENST00000452670 400 ntBASIC4.2□□□□□ -1.74
TRIM38O00635 AC098824.1-201ENST00000453565 980 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms