Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MIR5000-201ENST00000577717 103 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 AC104307.1-201ENST00000616142 196 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CACNA1AO00555 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CACNA1AO00555 TXNP6-201ENST00000510190 310 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.81□□□□□ -2.12
CACNA1AO00555 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.81□□□□□ -2.12
CACNA1AO00555 AL450489.1-201ENST00000612071 468 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
CACNA1AO00555 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.81□□□□□ -2.12
CACNA1AO00555 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CACNA1AO00555 SET-203ENST00000372688 801 ntTSL 2 BASIC1.8□□□□□ -2.12
CACNA1AO00555 SSXP10-201ENST00000402595 565 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AL390023.1-201ENST00000428836 262 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.8□□□□□ -2.12
CACNA1AO00555 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1AO00555 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1AO00555 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1AO00555 AC103987.3-201ENST00000582071 292 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1AO00555 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
CACNA1AO00555 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CACNA1AO00555 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CACNA1AO00555 MIR1468-201ENST00000410600 86 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 HMGB1P11-201ENST00000413899 637 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AC125238.1-201ENST00000448842 249 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AC092989.1-201ENST00000481235 277 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 MTAPP1-201ENST00000489154 819 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.8□□□□□ -2.12
CACNA1AO00555 RNA5SP436-201ENST00000516020 115 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.8□□□□□ -2.12
CACNA1AO00555 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC121333.1-201ENST00000567488 2709 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 MIR1265-201ENST00000408444 86 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 AL030996.1-201ENST00000411430 235 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.79□□□□□ -2.12
CACNA1AO00555 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.79□□□□□ -2.12
CACNA1AO00555 SNRPFP3-201ENST00000457792 225 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.79□□□□□ -2.12
CACNA1AO00555 AP003467.2-201ENST00000520175 319 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 PTP4A1P6-201ENST00000531034 478 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 SUB1P4-201ENST00000566062 339 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.79□□□□□ -2.12
CACNA1AO00555 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CACNA1AO00555 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 SNORA9.1-201ENST00000362412 131 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.79□□□□□ -2.12
CACNA1AO00555 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC097468.3-201ENST00000607956 456 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 AC068944.2-201ENST00000610373 403 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.79□□□□□ -2.12
CACNA1AO00555 AC073869.7-201ENST00000640874 297 ntBASIC1.79□□□□□ -2.12
CACNA1AO00555 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
CACNA1AO00555 RNU6-53P-201ENST00000365367 106 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.78□□□□□ -2.12
CACNA1AO00555 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.78□□□□□ -2.12
CACNA1AO00555 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.78□□□□□ -2.12
CACNA1AO00555 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.78□□□□□ -2.12
CACNA1AO00555 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.78□□□□□ -2.12
CACNA1AO00555 CALM1P1-201ENST00000442082 433 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 HAUS1P1-201ENST00000505275 832 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 AC022790.1-201ENST00000522872 204 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 AC068790.3-201ENST00000602988 553 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 DUXAP11-201ENST00000603858 526 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 MIR924-201ENST00000638017 53 ntBASIC1.78□□□□□ -2.12
CACNA1AO00555 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CACNA1AO00555 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CACNA1AO00555 Y_RNA.412-201ENST00000384001 104 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 RNU2-6P-201ENST00000411404 190 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 RPL23AP39-201ENST00000415533 405 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.77□□□□□ -2.13
CACNA1AO00555 AL353718.1-201ENST00000451028 517 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.77□□□□□ -2.13
CACNA1AO00555 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CACNA1AO00555 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CACNA1AO00555 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CACNA1AO00555 RNU1-133P-201ENST00000364867 167 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 Y_RNA.571-201ENST00000384753 98 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CACNA1AO00555 AL512504.1-201ENST00000415494 778 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 MTCO1P53-201ENST00000441633 699 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 MTCO1P48-201ENST00000448024 1096 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 RNU6-1132P-201ENST00000459214 107 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.77□□□□□ -2.13
CACNA1AO00555 IGLVIV-53-201ENST00000520107 367 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 HMGB1P41-201ENST00000520234 440 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.77□□□□□ -2.13
CACNA1AO00555 U73479.1-201ENST00000618062 168 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 AL353770.2-201ENST00000620024 78 ntBASIC1.77□□□□□ -2.13
CACNA1AO00555 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CACNA1AO00555 AC009541.1-201ENST00000438279 2662 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms