Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGN4O00479 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AP006437.1-201ENST00000641440 3685 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGN4O00479 PABPC1P7-201ENST00000413177 1513 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HMGN4O00479 SNORA67.1-201ENST00000364749 141 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 RNU6-317P-201ENST00000384031 107 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 MIR627-201ENST00000384979 97 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGN4O00479 RPL23AP39-201ENST00000415533 405 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 AL606495.1-201ENST00000422100 813 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGN4O00479 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGN4O00479 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGN4O00479 TRBV12-1-201ENST00000479785 344 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 RPL21P99-201ENST00000480369 423 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGN4O00479 HMGB1P47-201ENST00000511281 589 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC090751.1-201ENST00000566966 267 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 AC006329.2-201ENST00000611491 394 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGN4O00479 AC012150.2-201ENST00000621300 544 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 AL158801.5-201ENST00000623123 465 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 AC006963.1-201ENST00000624003 1052 ntBASIC1.63□□□□□ -2.15
HMGN4O00479 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGN4O00479 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGN4O00479 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
HMGN4O00479 SNORA70B-201ENST00000384210 135 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HMGN4O00479 Z82209.1-201ENST00000422141 2135 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 UBE2D3P2-201ENST00000424409 445 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AL645568.3-201ENST00000433683 316 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGN4O00479 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGN4O00479 RPL31P20-201ENST00000449593 360 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGN4O00479 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 RPS29P20-201ENST00000489592 171 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGN4O00479 AC092436.1-201ENST00000506450 503 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 RNU1-41P-201ENST00000516161 162 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 RNU1-48P-201ENST00000516400 162 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 OR4V1P-201ENST00000525394 1140 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 MTND2P26-201ENST00000528255 1029 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGN4O00479 YWHAZP1-201ENST00000556286 722 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGN4O00479 AC104581.2-201ENST00000572227 430 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGN4O00479 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGN4O00479 AC009318.2-201ENST00000610917 651 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 MIR7973-1-201ENST00000614683 76 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 AC020923.1-201ENST00000624021 917 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGN4O00479 AL359715.4-201ENST00000606629 1436 ntBASIC1.62□□□□□ -2.15
HMGN4O00479 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGN4O00479 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGN4O00479 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGN4O00479 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGN4O00479 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HMGN4O00479 SNORD114-1-201ENST00000362705 72 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGN4O00479 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGN4O00479 RNU2-40P-201ENST00000410833 196 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 NUP35P2-201ENST00000416748 943 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 AL160175.1-201ENST00000428124 247 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 RPL7P54-201ENST00000438336 674 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGN4O00479 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGN4O00479 SNORA59A-201ENST00000459326 152 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 AC072039.1-201ENST00000477611 581 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGN4O00479 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGN4O00479 HMGB3P3-201ENST00000510526 400 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGN4O00479 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGN4O00479 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGN4O00479 ERHP1-201ENST00000523006 310 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGN4O00479 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGN4O00479 AC106791.2-201ENST00000604680 391 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 AC011472.4-201ENST00000615848 491 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
HMGN4O00479 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGN4O00479 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGN4O00479 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 AL512646.1-201ENST00000269395 1077 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AL596028.1-201ENST00000326971 197 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 RNA5SP139-201ENST00000364340 117 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 VN1R51P-201ENST00000411675 945 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 MTCYBP24-201ENST00000420387 1106 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms