Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 MLLT10P2-201ENST00000506434 249 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 AC105914.1-201ENST00000511798 226 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC110760.3-202ENST00000515177 371 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM1O00151 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.08□□□□□ -1.92
PDLIM1O00151 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 AL158042.1-201ENST00000605338 460 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 MIR92B-201ENST00000607575 96 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC245297.2-201ENST00000610119 565 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC095031.1-201ENST00000623685 672 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 CRYM-AS1-204ENST00000637983 556 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM1O00151 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM1O00151 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM1O00151 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM1O00151 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM1O00151 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM1O00151 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.07□□□□□ -1.92
PDLIM1O00151 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM1O00151 RNU6-28P-201ENST00000362378 107 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 SNORD17-201ENST00000390930 237 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 RPL23AP29-201ENST00000397284 453 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 RPS3AP26-201ENST00000398259 784 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC007742.1-201ENST00000425789 329 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AL159987.2-201ENST00000432754 307 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 ELOCP26-201ENST00000436067 329 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC112198.1-201ENST00000505369 1220 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 RNU6-1095P-201ENST00000516148 108 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 RNU6-150P-201ENST00000516237 95 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 HSPE1P20-201ENST00000538133 289 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC007458.1-201ENST00000542812 373 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC005476.1-201ENST00000554427 397 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AC061975.8-201ENST00000587058 721 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AP000787.2-201ENST00000604432 568 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AL031176.1-201ENST00000604554 466 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.07□□□□□ -1.92
PDLIM1O00151 AP002782.1-201ENST00000623107 614 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 U6.105-201ENST00000637379 88 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AC006927.4-201ENST00000639187 543 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PDLIM1O00151 ZNF876P-202ENST00000398732 1485 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 CR383658.2-201ENST00000547576 1525 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 AP000776.1-201ENST00000530032 1663 ntBASIC3.07□□□□□ -1.92
PDLIM1O00151 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDLIM1O00151 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
PDLIM1O00151 HMGB1P17-201ENST00000403495 628 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 TPMTP2-201ENST00000414372 726 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.06□□□□□ -1.92
PDLIM1O00151 YPEL5P1-201ENST00000419731 367 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AC099677.1-201ENST00000420575 175 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AC079780.1-201ENST00000428259 207 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 MTCO2P20-201ENST00000437339 673 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AL022578.1-201ENST00000439330 1433 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.06□□□□□ -1.92
PDLIM1O00151 RNU7-136P-201ENST00000458819 69 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 SNORD11.1-201ENST00000459482 85 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 AC008571.1-201ENST00000467232 300 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 RPL23AP11-201ENST00000475260 469 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 RPS27AP9-201ENST00000477681 438 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms