Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 BNIP3P11-201ENST00000603878 563 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC080013.4-201ENST00000607624 649 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL672296.1-201ENST00000427780 2158 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-1249P-201ENST00000363237 111 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-931P-201ENST00000363850 107 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-343P-201ENST00000364709 104 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-952P-201ENST00000391164 108 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 SKINT1L-201ENST00000401057 817 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL121972.1-201ENST00000402023 252 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AC092447.6-201ENST00000414578 210 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 COTL1P1-201ENST00000422309 375 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AC010099.3-201ENST00000423896 409 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AC016696.1-201ENST00000446949 318 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 SUMO2P2-201ENST00000456482 255 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL139824.2-201ENST00000458731 1095 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL31P50-201ENST00000471002 296 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 NCOR1P1-202ENST00000486162 291 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 TXNP6-201ENST00000510190 310 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 OR4P1P-201ENST00000530808 1136 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AC009094.1-201ENST00000564443 426 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 LARP7P3-201ENST00000579888 337 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 XIAPP1-201ENST00000603162 600 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL133507.1-201ENST00000605269 557 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 AL136981.2-201ENST00000617319 734 ntBASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NEDD8-MDP1E9PL57 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA44-201ENST00000384584 132 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AL138880.1-201ENST00000405824 642 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU2-15P-201ENST00000410692 191 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 RPS7P13-201ENST00000413955 498 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL7P30-201ENST00000420888 709 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AL606662.1-201ENST00000445763 553 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 EEF1E1P1-201ENST00000446998 430 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 ARPC3P5-201ENST00000448802 534 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 USP9YP10-201ENST00000454868 628 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 MTCO3P11-201ENST00000455103 774 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 MIR4999-201ENST00000585029 91 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC012669.1-201ENST00000603209 283 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC018755.4-201ENST00000619715 454 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC017037.3-201ENST00000625016 472 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC097714.1-201ENST00000511272 1647 ntBASIC3.19□□□□□ -1.9
NEDD8-MDP1E9PL57 AC244517.1-201ENST00000606030 2086 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AP000526.1-201ENST00000603308 1388 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms