Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.43□□□□□ -2.18
COL6A5A8TX70 AC091488.1-201ENST00000604239 660 ntBASIC1.43□□□□□ -2.18
COL6A5A8TX70 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL6A5A8TX70 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.43□□□□□ -2.18
COL6A5A8TX70 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.43□□□□□ -2.18
COL6A5A8TX70 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.43□□□□□ -2.18
COL6A5A8TX70 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
COL6A5A8TX70 SNRPEP3-201ENST00000338402 276 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 RNU6-492P-201ENST00000363035 104 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 U8.8-201ENST00000365399 135 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 RN7SKP200-201ENST00000410564 320 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 RPL36AP33-201ENST00000450395 310 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC108734.3-201ENST00000481241 1165 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 NF1P5-201ENST00000588287 448 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC023043.3-201ENST00000593113 385 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AL353748.2-201ENST00000622148 471 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A5A8TX70 FAM35CP-201ENST00000554755 2470 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A5A8TX70 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A5A8TX70 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL6A5A8TX70 Y_RNA.518-201ENST00000384552 113 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 GSTA12P-201ENST00000402398 508 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 ARF4P2-201ENST00000430209 526 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 ARPC3P1-201ENST00000437218 533 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AL583843.1-201ENST00000456070 346 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC107032.1-201ENST00000485945 480 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AF131216.2-201ENST00000512316 564 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 CBX3P4-201ENST00000538909 354 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC008127.2-201ENST00000549925 1075 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AC012531.5-201ENST00000611375 151 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.42□□□□□ -2.18
COL6A5A8TX70 AL133216.2-202ENST00000634512 349 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.42□□□□□ -2.18
COL6A5A8TX70 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 AC123912.3-201ENST00000600907 1367 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 TAS2R15P-201ENST00000390674 928 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AL136133.1-201ENST00000413694 376 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 SAR1AP4-201ENST00000429225 591 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AC244505.5-201ENST00000443639 207 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 HMGB3P21-201ENST00000452483 547 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 RPL21P18-201ENST00000469899 480 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 RN7SL297P-201ENST00000483161 293 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 OR4G11P-202ENST00000642116 1414 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 MTCO1P14-201ENST00000441695 1559 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A5A8TX70 RPL9P33-201ENST00000484311 566 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 SNORA31.15-201ENST00000516771 132 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 AC084035.1-201ENST00000634543 607 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A5A8TX70 OR4G1P-203ENST00000641984 1631 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.41□□□□□ -2.18
COL6A5A8TX70 MIR193B-201ENST00000384907 83 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 HMGB3P2-201ENST00000411913 584 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC007390.1-201ENST00000415722 356 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC244505.4-201ENST00000434905 287 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 BNIP3P2-201ENST00000441221 577 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 SSXP5-201ENST00000443473 287 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC008571.1-201ENST00000467232 300 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC011979.1-201ENST00000472300 483 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 RPL23AP44-201ENST00000482216 473 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AP001207.1-201ENST00000524051 481 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.4□□□□□ -2.18
COL6A5A8TX70 BX649567.1-201ENST00000642071 1134 ntBASIC1.4□□□□□ -2.18
COL6A5A8TX70 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
COL6A5A8TX70 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.4□□□□□ -2.19
COL6A5A8TX70 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A5A8TX70 SNORD21-201ENST00000383953 95 ntBASIC1.4□□□□□ -2.19
COL6A5A8TX70 MIR216A-201ENST00000385063 110 ntBASIC1.4□□□□□ -2.19
COL6A5A8TX70 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.4□□□□□ -2.19
COL6A5A8TX70 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A5A8TX70 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.4□□□□□ -2.19
COL6A5A8TX70 MTCYBP17-201ENST00000503579 789 ntBASIC1.4□□□□□ -2.19
COL6A5A8TX70 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.4□□□□□ -2.19
COL6A5A8TX70 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A5A8TX70 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms