Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC023158.2-201ENST00000614876 543 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 OR1S1-201ENST00000624470 978 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC116618.1-201ENST00000634617 774 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AP000526.1-201ENST00000603308 1388 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RNU5D-1-201ENST00000363299 116 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RPL7P25-201ENST00000404151 721 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 USP9YP26-201ENST00000421008 661 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AL158156.1-201ENST00000422509 473 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AL353678.1-201ENST00000422735 741 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AL049610.1-201ENST00000423374 372 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 MTATP6P26-201ENST00000445926 662 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 ARPC3P2-201ENST00000457786 533 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 HMGN2P13-201ENST00000476476 274 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 DSTNP2-201ENST00000504533 515 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC026427.2-201ENST00000506228 536 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC104090.1-201ENST00000506341 1171 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC034244.1-201ENST00000507687 207 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC010625.1-201ENST00000511296 403 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RN7SKP31-201ENST00000516354 278 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AP001804.3-201ENST00000525146 880 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 MIR5195-201ENST00000583555 115 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 NIFKP6-201ENST00000598115 845 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AL158042.1-201ENST00000605338 460 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 AC118273.1-201ENST00000525324 3006 ntBASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49BA6NDI0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 MTND5P19-201ENST00000424872 1794 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 MTCO1P23-201ENST00000415223 1526 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 ZNF542P-204ENST00000482727 1305 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 FAM133CP-201ENST00000332869 704 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RNU6-525P-201ENST00000363685 104 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RNU6-173P-201ENST00000364215 104 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RNU6-157P-201ENST00000383957 107 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 Y_RNA.465-201ENST00000384293 102 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 SNORD51-201ENST00000384320 80 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC016769.3-201ENST00000396562 315 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RNA5SP274-201ENST00000410484 108 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RNU2-15P-201ENST00000410692 191 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RAP1BP1-201ENST00000412709 553 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC092447.6-201ENST00000414578 210 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 LUZP4P1-201ENST00000415420 344 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC007435.1-201ENST00000421086 415 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 MTND1P32-201ENST00000433043 938 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 ATP5F1P1-201ENST00000433775 569 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 UBE2D3P1-201ENST00000436669 444 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RPL21P134-201ENST00000453468 483 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AP004217.1-201ENST00000480579 346 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC006445.1-201ENST00000491925 405 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC116353.3-201ENST00000511215 249 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AC138915.2-201ENST00000569776 97 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 AL354943.1-201ENST00000572103 781 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 COX6CP3-201ENST00000580869 223 ntBASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49BA6NDI0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms