Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AADACP1-206ENST00000561502 1193 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AL009028.1-201ENST00000604895 802 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 AL110115.1-201ENST00000614396 364 ntBASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCN10AQ9Y5Y9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC022336.2-201ENST00000568966 2538 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 RNA5SP213-201ENST00000391031 106 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 DPPA2P1-201ENST00000428060 556 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC007677.1-201ENST00000445757 515 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 TRBV26-201ENST00000456572 344 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 RPS27AP9-201ENST00000477681 438 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 FABP5P6-201ENST00000510588 409 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC068339.2-201ENST00000534395 618 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC016727.1-205ENST00000605437 569 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AL627309.6-201ENST00000606857 840 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AP002907.1-201ENST00000606361 1430 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AL356292.1-201ENST00000283110 373 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 Y_RNA.118-201ENST00000363300 101 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 SNORA26.7-201ENST00000391288 122 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC099677.1-201ENST00000420575 175 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 RN7SL499P-201ENST00000481141 276 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC034268.2-201ENST00000571784 482 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 GLUD1P4-201ENST00000590914 418 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AC008962.1-201ENST00000605729 304 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 AP004247.3-201ENST00000608682 624 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
SCN10AQ9Y5Y9 MTND5P7-201ENST00000413558 1798 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RNA5SP139-201ENST00000364340 117 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 SNORA14A-201ENST00000364773 135 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 AC233728.2-201ENST00000425348 757 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RPL7P29-201ENST00000437151 728 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 AL513321.1-201ENST00000441175 761 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RPS27P5-201ENST00000444247 244 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RN7SKP210-201ENST00000459176 261 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-548P-201ENST00000517083 115 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 AC074029.2-201ENST00000551045 634 ntBASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN10AQ9Y5Y9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 RNU4-74P-201ENST00000411280 161 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC092447.7-201ENST00000422212 1621 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 RPS23P3-201ENST00000470993 430 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AL022099.1-201ENST00000604551 712 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AL359893.1-201ENST00000447628 1580 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-837P-201ENST00000391056 108 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 SSXP9-201ENST00000417503 292 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC109583.1-201ENST00000432156 268 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 SETP8-201ENST00000435341 628 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 NCOR1P1-202ENST00000486162 291 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 SUMO1P1-201ENST00000497904 306 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC105914.1-201ENST00000511798 226 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-295P-201ENST00000516901 104 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AL160237.3-201ENST00000604114 1013 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC073387.2-201ENST00000604797 784 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 YWHAEP7-203ENST00000622054 312 ntBASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN10AQ9Y5Y9 AC123912.3-201ENST00000600907 1367 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AC109780.2-201ENST00000413467 845 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 TOMM22P1-201ENST00000418578 312 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 Z99714.1-201ENST00000450463 807 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms