Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP479-201ENST00000364858 117 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 Y_RNA.517-201ENST00000384551 106 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU2-66P-201ENST00000410650 161 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 BX295541.1-201ENST00000417774 250 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC018630.2-202ENST00000422992 927 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 USP9YP36-201ENST00000424581 829 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010975.2-201ENST00000427781 588 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 COX6B1P7-201ENST00000430845 235 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 MTND1P34-201ENST00000438556 671 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 TXNP1-201ENST00000441872 371 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AL662791.1-201ENST00000441992 928 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC133473.1-201ENST00000455173 299 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC106872.2-201ENST00000494303 480 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 DUXAP2-201ENST00000519198 589 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 IFITM8P-201ENST00000522529 394 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 FAM60DP-201ENST00000524174 632 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 ZNF192P1-203ENST00000565888 810 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC068790.5-201ENST00000602741 355 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR432-201ENST00000606207 94 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR98-201ENST00000606724 119 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 AC244100.1-202ENST00000621554 382 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.7□□□□□ -1.66
COL4A3BPQ9Y5P4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 HSPE1P11-201ENST00000339579 310 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP52-201ENST00000362448 134 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL359634.1-202ENST00000404721 284 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP317-201ENST00000410176 116 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP311-201ENST00000411290 116 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 MTND3P17-201ENST00000416968 344 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL590383.1-201ENST00000428602 75 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL31P35-201ENST00000431058 377 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 HMGN2P16-201ENST00000456802 261 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL672167.3-201ENST00000465951 960 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS3AP17-201ENST00000472594 777 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010631.1-201ENST00000474150 156 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS29P19-201ENST00000479709 171 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AL358832.1-201ENST00000497800 389 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010493.1-201ENST00000513479 292 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC099522.1-202ENST00000514718 367 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP315-201ENST00000516340 116 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU7-51P-201ENST00000516560 62 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP312-201ENST00000517068 116 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR3160-1-201ENST00000577972 85 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC087241.4-201ENST00000612441 480 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 uc_338.32-201ENST00000615087 172 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 ZYXP1-201ENST00000617638 118 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC099842.1-201ENST00000619919 596 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 AC110801.1-201ENST00000623590 212 ntBASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms