Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA11Q9Y5H2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.19-201ENST00000362462 99 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.60-201ENST00000362831 98 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR130A-201ENST00000385274 89 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 SAR1AP2-201ENST00000392696 594 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-325P-201ENST00000411132 105 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 MRPL53P1-201ENST00000414323 319 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AL353621.1-201ENST00000418219 243 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 FCF1P4-201ENST00000448326 183 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ACA64.1-201ENST00000459171 127 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SL170P-201ENST00000487098 295 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 RPS24P16-201ENST00000497294 392 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 SNORD116-26-201ENST00000516006 96 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC008489.1-201ENST00000524271 483 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR4271-201ENST00000582451 67 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC104695.2-201ENST00000605056 775 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC098479.1-201ENST00000609225 154 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 AC034102.8-201ENST00000615146 484 ntBASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA11Q9Y5H2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AP001029.2-203ENST00000589795 4910 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 MTND5P6-201ENST00000422338 1798 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.64-201ENST00000362845 102 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SKP145-201ENST00000363291 303 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP433-201ENST00000364491 114 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.534-201ENST00000384599 112 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-882P-201ENST00000391025 103 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AL513475.1-201ENST00000406602 315 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 U3.35-201ENST00000408405 208 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR1203-201ENST00000408812 85 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU7-169P-201ENST00000459456 61 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 SNORD125-201ENST00000459538 96 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 DUTP1-201ENST00000493631 470 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP473-201ENST00000516402 125 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AC021678.3-201ENST00000517893 476 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AL390123.1-201ENST00000603216 237 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 RAC1P9-201ENST00000604990 392 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AL159153.1-201ENST00000619688 317 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AC130454.1-201ENST00000622948 401 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 AC073869.8-201ENST00000641806 335 ntBASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.5□□□□□ -1.53
PCDHGA11Q9Y5H2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU1-150P-201ENST00000362491 162 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 RNY3P11-201ENST00000364153 102 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-1179P-201ENST00000384667 107 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.562-201ENST00000384695 113 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR628-201ENST00000385229 95 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 HMGB1P20-201ENST00000402555 677 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AL591034.2-201ENST00000402839 359 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms