Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 MTND5P26-201ENST00000426018 1752 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 PRO1804-201ENST00000623780 2050 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RNU5F-7P-201ENST00000363696 115 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RNU6-259P-201ENST00000383999 107 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RNU6-809P-201ENST00000384461 107 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 Y_RNA.582-201ENST00000391023 95 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 MTCO1P17-201ENST00000411522 491 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RAD23BP2-201ENST00000416003 1207 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AIMP1P1-201ENST00000418670 937 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC244098.2-201ENST00000422068 99 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 MTCO2P5-201ENST00000422621 426 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 PSMA6P3-201ENST00000428242 164 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 HSPE1P28-201ENST00000443139 211 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC006480.1-201ENST00000449887 378 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL033528.1-201ENST00000453780 140 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 SNRPFP4-201ENST00000456366 242 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL136097.1-201ENST00000456945 913 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AP001992.1-205ENST00000462248 379 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 HIGD1AP3-201ENST00000515857 278 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC022695.1-201ENST00000522089 237 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 OR4R3P-201ENST00000525084 838 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AP003392.2-201ENST00000527269 208 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 MIR5186-201ENST00000577504 120 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 KLKP1-201ENST00000595979 403 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC090578.1-201ENST00000604955 591 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC108747.1-201ENST00000609508 535 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL731566.2-201ENST00000618971 317 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 U6.98-201ENST00000637157 84 ntBASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 NUP58P1-201ENST00000502546 1738 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 SNORA51.2-201ENST00000364595 132 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 RNU6-533P-201ENST00000384144 107 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 PTMAP5-201ENST00000393073 333 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 RPS20P2-201ENST00000402520 389 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 RPL7P25-201ENST00000404151 721 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 RPL21P65-201ENST00000406094 466 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 RPS3AP3-201ENST00000411933 242 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 USP9YP13-201ENST00000417797 480 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 HMGB3P20-201ENST00000417997 600 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 GLRXP1-201ENST00000423261 334 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC002075.2-201ENST00000425207 252 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC009961.2-201ENST00000435771 251 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 MTND6P13-201ENST00000443510 523 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 Z82190.1-201ENST00000454534 490 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 KLF3P2-201ENST00000465138 268 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 IGKV2D-36-201ENST00000518643 226 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 IGKV2-23-201ENST00000518729 323 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC245505.1-201ENST00000556398 224 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC006960.3-201ENST00000561845 705 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 OR4G1P-201ENST00000588632 938 ntBASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.22□□□□□ -1.89
MRPS28Q9Y2Q9 AL592436.1-201ENST00000605135 558 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms