Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CIR1P3-201ENST00000405137 479 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 BX295541.1-201ENST00000417774 250 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 RPS15AP40-201ENST00000419621 391 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 PIGFP2-201ENST00000421400 651 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 MTND4LP10-201ENST00000435146 291 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL133547.1-201ENST00000448546 220 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC010493.1-201ENST00000513479 292 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 CYCSP30-201ENST00000546447 172 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC025627.2-201ENST00000576220 160 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 HMGN1P30-201ENST00000589286 268 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC007566.2-201ENST00000603642 413 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL356321.1-201ENST00000621360 228 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 CR392039.5-201ENST00000623201 510 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL008636.1-201ENST00000625038 1018 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AL157786.1-207ENST00000627771 695 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 MIR6863-201ENST00000636112 90 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX2IPQ9Y2D8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
SSX2IPQ9Y2D8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
SSX2IPQ9Y2D8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.34□□□□□ -1.72
SSX2IPQ9Y2D8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 GNG5P1-201ENST00000255500 204 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 Y_RNA.9-201ENST00000362354 101 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RNU4-12P-201ENST00000365233 139 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 SNORD82-201ENST00000365530 70 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-213P-201ENST00000384051 104 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL356421.1-201ENST00000403255 413 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RPS23P10-201ENST00000416185 486 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL035410.1-201ENST00000427409 427 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 MTND1P2-201ENST00000430604 821 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RPL23AP89-201ENST00000439324 255 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL358232.1-201ENST00000448030 501 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 ANP32BP2-201ENST00000454525 545 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RPS20P32-201ENST00000456044 356 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC146507.1-201ENST00000468335 354 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 RPL31P58-201ENST00000469001 379 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC087385.1-201ENST00000475062 312 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC108145.1-201ENST00000503770 153 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 HMGB1P29-201ENST00000505659 499 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC016065.2-201ENST00000514530 444 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 CENPUP2-201ENST00000555897 1186 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC090615.1-201ENST00000577519 154 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC020914.4-201ENST00000597690 277 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC245014.2-201ENST00000603689 287 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC246785.4-201ENST00000605374 287 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 OR10AB1P-201ENST00000609613 938 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC007014.2-201ENST00000615581 479 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 C2orf27A-204ENST00000623058 969 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 AC068880.5-201ENST00000624331 290 ntBASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms