Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 SNORA73.1-201ENST00000363107 205 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RNU4-70P-201ENST00000384579 139 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.556-201ENST00000384677 113 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RNU2-3P-201ENST00000410144 191 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RPL30P2-201ENST00000414021 291 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL354710.1-201ENST00000453641 246 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 SNORD97-201ENST00000459187 142 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RN7SL799P-201ENST00000475891 298 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RN7SL244P-201ENST00000493405 297 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC073073.1-201ENST00000493920 463 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC116655.1-201ENST00000508324 901 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC026782.1-201ENST00000512952 449 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC004980.4-201ENST00000513375 203 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.670-201ENST00000516255 105 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.708-201ENST00000516950 96 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RNU6-685P-201ENST00000517088 95 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC023442.1-201ENST00000531247 422 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 OR10G5P-201ENST00000532733 358 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AL121576.1-201ENST00000556055 276 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 MIR4691-201ENST00000583764 85 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 ATP1B3P1-201ENST00000605365 821 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC093799.2-201ENST00000610062 578 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 AC004696.1-201ENST00000614345 607 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 MIR6128-201ENST00000615528 109 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 CDC27P3-201ENST00000635418 1910 ntBASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP4E1Q9UPM8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.307-201ENST00000365022 117 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 NDUFS5P1-201ENST00000405668 289 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 MIR1178-201ENST00000408396 91 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC080125.1-201ENST00000414888 684 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 DPH3P2-201ENST00000422618 250 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 FHP1-201ENST00000442741 703 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AL356981.1-201ENST00000454879 684 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AP002812.1-201ENST00000495378 474 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC021146.3-201ENST00000511911 260 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 RNU6-388P-201ENST00000517012 105 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 RNU6-389P-201ENST00000517048 105 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 RNU6-699P-201ENST00000517081 110 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 NF1P5-201ENST00000588287 448 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC025588.3-201ENST00000604182 274 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC018462.2-201ENST00000605375 395 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC100812.1-201ENST00000607622 580 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.17□□□□□ -1.58
AP4E1Q9UPM8 AC027228.2-201ENST00000567141 2154 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 ZNF33CP-201ENST00000432492 2030 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AL158163.1-201ENST00000603915 1649 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms