Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC068714.1-201ENST00000559623 800 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AL845331.3-202ENST00000562856 261 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC136618.2-201ENST00000575091 400 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 SNRPGP17-201ENST00000603780 214 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MIR432-201ENST00000606207 94 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AC005014.2-201ENST00000607795 599 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 DISC2.1-201ENST00000612827 205 ntBASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOTCH3Q9UM47 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU6-505P-201ENST00000384427 107 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU6-878P-201ENST00000384578 110 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 TXNP7-201ENST00000406296 293 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 MIR1911-201ENST00000410783 80 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL139247.1-201ENST00000422768 325 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 GTF2IP20-201ENST00000431663 360 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 SEPT14P3-201ENST00000439401 183 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL732372.2-207ENST00000445840 183 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC005002.1-201ENST00000447458 540 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC132479.1-201ENST00000449160 144 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 SEPT14P2-201ENST00000453405 183 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 MTND1P12-201ENST00000455231 147 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL133244.1-201ENST00000456007 258 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.632-201ENST00000459189 102 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPL7P38-201ENST00000488396 739 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPS4XP18-201ENST00000495480 763 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 SEPT14P4-201ENST00000513445 186 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU4-49P-201ENST00000516080 140 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU6-445P-201ENST00000516949 107 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC008802.1-201ENST00000519121 791 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 FO082796.1-201ENST00000523795 183 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AP003034.1-201ENST00000534621 422 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 DNAJC8P1-201ENST00000554535 372 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC022655.2-201ENST00000577280 318 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC103710.3-201ENST00000608157 948 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 uc_338.5-201ENST00000611839 155 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC243312.2-201ENST00000623340 601 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 NMD3P1-201ENST00000439704 1488 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 ENSAP3-201ENST00000312710 333 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 Y_RNA.381-201ENST00000365666 102 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU4-70P-201ENST00000384579 139 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AL354719.1-201ENST00000406535 843 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RNU6-77P-201ENST00000410554 91 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RN7SKP140-201ENST00000411196 284 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC092745.2-202ENST00000411880 369 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 BX295541.1-201ENST00000417774 250 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPL35AP12-201ENST00000425362 338 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPS25P9-201ENST00000435591 252 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPS27AP1-201ENST00000475545 471 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC027575.1-201ENST00000481064 460 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 RPL29P14-201ENST00000495837 428 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AF131216.2-201ENST00000512316 564 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC108120.2-201ENST00000512973 294 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 DEFB109D-201ENST00000529497 240 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 AC110588.1-201ENST00000559699 137 ntBASIC3.04□□□□□ -1.92
NOTCH3Q9UM47 GTF2IP8-201ENST00000560687 584 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms