Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 AC090337.1-201ENST00000579651 2074 ntBASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
BRPF3Q9ULD4 MTND5P3-201ENST00000438536 1800 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RNA5SP52-201ENST00000362448 134 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RNU5E-6P-201ENST00000365574 115 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RNU6-356P-201ENST00000384140 107 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RNU11-4P-201ENST00000391149 133 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 ARL5AP1-201ENST00000418991 388 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 MTND2P23-201ENST00000422990 651 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RPL7L1P10-201ENST00000427790 463 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RPS27P18-201ENST00000431701 247 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RPS6P12-201ENST00000432491 726 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC005094.1-201ENST00000440420 368 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 snoU109.4-201ENST00000458953 143 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RPL23AP56-201ENST00000460778 453 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 RN7SL319P-201ENST00000480656 221 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 MYL12AP1-201ENST00000518490 515 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 IGLV3-26-201ENST00000520756 302 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AC009643.2-201ENST00000603543 1448 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AL139395.1-201ENST00000603662 160 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 AL360085.1-201ENST00000604713 532 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 uc_338.11-201ENST00000619132 160 ntBASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
BRPF3Q9ULD4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
BRPF3Q9ULD4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.77□□□□□ -1.48
BRPF3Q9ULD4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 Y_RNA.259-201ENST00000364619 101 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 TBCAP2-201ENST00000416175 326 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 ATP5HP2-201ENST00000433885 485 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 PTMAP6-201ENST00000439110 327 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC069285.2-201ENST00000440210 275 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 BRK1P2-201ENST00000442875 223 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 RPL21P133-201ENST00000443666 476 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 MRPL48P1-201ENST00000445390 636 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 RPL23AP43-201ENST00000446445 471 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC009963.2-201ENST00000453431 138 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 SNRPFP3-201ENST00000457792 225 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 snoU13.20-201ENST00000459180 104 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC079804.1-201ENST00000461922 436 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 RPL7AP6-201ENST00000477943 801 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 RN7SL97P-201ENST00000486780 299 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC004453.1-201ENST00000487895 408 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 MTND5P5-201ENST00000503764 376 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC020661.2-201ENST00000560114 134 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC093249.1-201ENST00000567049 203 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 MIR4293-201ENST00000584305 78 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AP001836.1-201ENST00000604675 523 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AP001486.3-201ENST00000615334 372 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 uc_338.34-201ENST00000617467 174 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC011155.2-201ENST00000623202 216 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC067931.1-201ENST00000624190 671 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 MTND4P14-201ENST00000435799 1354 ntBASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.77□□□□□ -1.49
BRPF3Q9ULD4 BDP1P-201ENST00000582658 1990 ntBASIC5.76□□□□□ -1.49
BRPF3Q9ULD4 MAPK10-303ENST00000641324 3959 ntBASIC5.76□□□□□ -1.49
BRPF3Q9ULD4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.76□□□□□ -1.49
BRPF3Q9ULD4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms