Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 snoU109.4-201ENST00000458953 143 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC006390.1-201ENST00000508068 283 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 RNU6-27P-201ENST00000516146 107 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC138761.3-201ENST00000579993 334 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AL021368.1-201ENST00000607490 540 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC005046.1-201ENST00000608515 625 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AP006248.3-201ENST00000623580 594 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CTNNA3Q9UI47 MTCO1P4-201ENST00000520516 1409 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AL513185.3-201ENST00000433335 1300 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 U3.29-201ENST00000391296 212 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AL024474.1-201ENST00000404655 591 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 RNA5SP21-201ENST00000410917 96 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC109583.1-201ENST00000432156 268 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 RPL36AP6-201ENST00000435770 321 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 HSFY3P-201ENST00000444242 1191 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 UBBP3-201ENST00000445497 241 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AL359385.1-201ENST00000456509 365 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC025768.1-201ENST00000510057 267 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 ARL2BPP5-201ENST00000523141 481 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AP000916.1-201ENST00000533869 835 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AL353748.2-201ENST00000622148 471 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AC091948.2-201ENST00000636510 279 ntBASIC3.27□□□□□ -1.89
CTNNA3Q9UI47 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RPL21P75-201ENST00000396599 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RPL21P28-201ENST00000401418 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AL592114.1-201ENST00000403842 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RNU4-27P-201ENST00000410889 139 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AL121882.1-201ENST00000422893 417 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC019097.1-201ENST00000424783 735 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 EZH2P1-201ENST00000431167 291 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC004866.2-201ENST00000438285 481 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 EEF1B2P7-201ENST00000451177 676 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RPL21P39-201ENST00000463605 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC011979.1-201ENST00000472300 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RPL21P93-201ENST00000480465 489 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC233702.1-201ENST00000482905 502 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC087190.1-201ENST00000484462 480 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC093591.1-201ENST00000491435 481 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RPL21P16-201ENST00000495531 483 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC009901.1-201ENST00000506703 541 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC109471.1-201ENST00000511631 612 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 RAC1P5-201ENST00000512182 576 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC027338.1-201ENST00000514840 825 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC011611.5-201ENST00000552477 578 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 ATP1B3P1-201ENST00000605365 821 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 VN1R9P-201ENST00000614184 867 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AL445493.3-201ENST00000619568 477 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AL163152.1-201ENST00000642001 374 ntBASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTNNA3Q9UI47 AC062016.1-201ENST00000355719 319 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 MIR1261-201ENST00000408659 82 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 AC246680.2-201ENST00000422106 389 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 HMGN2P30-201ENST00000423237 256 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 SNRPGP6-201ENST00000451124 220 ntBASIC3.25□□□□□ -1.89
CTNNA3Q9UI47 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms