Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL137847.3-201ENST00000611521 109 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC245517.5-201ENST00000611529 162 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AL590396.2-201ENST00000636511 1041 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 MAPK10-266ENST00000641066 6555 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 SEC63P2-201ENST00000503863 1939 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RNU6-173P-201ENST00000364215 104 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RNU6-40P-201ENST00000384254 107 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 U3.26-201ENST00000391236 204 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 ANAPC10P1-201ENST00000395991 556 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 TATDN1P1-201ENST00000414123 891 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RPP40P1-201ENST00000426762 456 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AL109741.2-201ENST00000455561 343 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RPS20P24-201ENST00000457473 361 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 LINC00888-204ENST00000487386 421 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 OR9N1P-202ENST00000494289 481 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 XKRY-201ENST00000510392 1100 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC008716.1-201ENST00000511084 513 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC006023.1-201ENST00000603944 259 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AL136363.1-201ENST00000605349 337 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
VPS29Q9UBQ0 ZNF271P-202ENST00000465539 1970 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 TAF9BP2-201ENST00000400856 499 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 RN7SKP140-201ENST00000411196 284 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 VPS26AP1-201ENST00000483197 979 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 RPS15AP34-201ENST00000487776 387 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 SNORA70.16-201ENST00000516390 95 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC234778.2-201ENST00000566241 354 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 RPL23AP92-201ENST00000603609 255 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC055876.5-201ENST00000605667 259 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC034102.8-201ENST00000615146 484 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC008669.1-201ENST00000565823 2178 ntBASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS29Q9UBQ0 AC130650.2-201ENST00000618736 2403 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 RPS4XP8-201ENST00000402039 771 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 RPS4XP7-201ENST00000406274 780 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 HMGB3P31-201ENST00000413333 595 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 MTATP6P11-201ENST00000428071 670 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC004866.2-201ENST00000438285 481 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 RNF2P1-201ENST00000442955 1010 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AL589880.1-201ENST00000448271 287 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 TRBV26-201ENST00000456572 344 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 OR5BM1P-201ENST00000512021 366 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms