Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RN7SKP280-201ENST00000364196 304 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 Y_RNA.318-201ENST00000365131 97 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 MIR3074-201ENST00000384885 81 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RNU6-278P-201ENST00000390945 109 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RNU4-65P-201ENST00000410473 140 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 UBE2FP1-201ENST00000416536 447 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC090774.1-201ENST00000435925 246 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC122718.1-201ENST00000439448 744 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 MTND1P27-201ENST00000451117 902 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 SSXP1-201ENST00000453640 473 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 snoU109.1-201ENST00000459339 135 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RPL9P32-201ENST00000464118 620 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 FAM133DP-201ENST00000464802 691 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC108860.1-201ENST00000484521 383 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RN7SL271P-201ENST00000487601 295 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 MTCO2P32-201ENST00000514865 403 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AP000857.1-201ENST00000532151 543 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RPL21P5-201ENST00000554662 472 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 MIR3611-201ENST00000584484 83 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 VN1R79P-201ENST00000593540 513 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC064807.4-201ENST00000607201 407 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL391813.2-201ENST00000609113 322 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC108479.2-201ENST00000617314 601 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC048347.1-201ENST00000624621 427 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL603839.4-201ENST00000624658 1005 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 DDX10P1-201ENST00000448545 1933 ntBASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCN3Q9P1Z3 AC092326.2-201ENST00000624772 1561 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 MRPL42P2-201ENST00000403169 426 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 SNORA3C-201ENST00000408792 125 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 RN7SKP159-201ENST00000410657 292 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 RPS15AP36-201ENST00000492022 382 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 SNORA31.8-201ENST00000516327 108 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 NARSP2-201ENST00000518524 679 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AP003181.2-201ENST00000528941 181 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 RNU6-87P-201ENST00000607561 108 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 AC108747.1-201ENST00000609508 535 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 GABPAP-201ENST00000419271 1356 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 TEX21P-201ENST00000447107 1476 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HCN3Q9P1Z3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.81
HCN3Q9P1Z3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HCN3Q9P1Z3 AL138713.1-201ENST00000624026 2130 ntBASIC3.71□□□□□ -1.81
HCN3Q9P1Z3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 MIR423-201ENST00000362201 94 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms