Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SNORA66-201ENST00000384792 133 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SNORA68.2-201ENST00000391263 128 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AL590704.1-201ENST00000402856 794 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 MIR1302-3-201ENST00000408128 138 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RN7SL188P-201ENST00000469842 285 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RPL31P60-201ENST00000478450 367 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RN7SL319P-201ENST00000480656 221 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC015911.1-201ENST00000495111 156 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC026402.1-201ENST00000513642 170 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 GMPSP1-201ENST00000514075 579 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 MTCO2P24-201ENST00000515611 426 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.670-201ENST00000516255 105 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 COX6CP5-201ENST00000527162 228 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC068446.3-201ENST00000555285 382 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 MIR4458-201ENST00000578872 75 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 MIR4503-201ENST00000582187 83 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 AC011755.1-201ENST00000623763 2049 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 MTND5P30-201ENST00000452896 1731 ntBASIC5.57□□□□□ -1.52
CXXC1Q9P0U4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 ASNSP1-201ENST00000518311 1939 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 SAMMSON-226ENST00000642089 1582 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC090337.1-201ENST00000579651 2074 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 SNORD62.1-201ENST00000362541 86 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.149-201ENST00000363558 117 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 SNORA70.9-201ENST00000384370 135 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 RNU6-882P-201ENST00000391025 103 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 RN7SKP100-201ENST00000411258 284 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 SNORD125-201ENST00000459538 96 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC087884.1-201ENST00000469738 328 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AP000926.1-201ENST00000479573 241 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 RNU6-307P-201ENST00000516743 106 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC025423.5-201ENST00000550230 219 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 MIR5692A1-201ENST00000580523 69 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 SNORD84-203ENST00000584275 78 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC006157.1-201ENST00000611750 366 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AC138965.3-201ENST00000623875 498 ntBASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CXXC1Q9P0U4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 AC015799.1-201ENST00000622996 3122 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 Y_RNA.452-201ENST00000384202 108 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 RNU6-14P-201ENST00000384630 106 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 RNU6-95P-201ENST00000384697 107 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 RNU6-331P-201ENST00000384724 107 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 SNORA57.1-201ENST00000391227 145 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 HSPE1P8-201ENST00000406997 288 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 HIGD1AP11-201ENST00000438361 280 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.55□□□□□ -1.52
CXXC1Q9P0U4 RPL21P23-201ENST00000446654 460 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms