Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 SNORA56-201ENST00000383966 129 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RNU6-38P-201ENST00000384085 107 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 MIR192-201ENST00000384915 110 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RNU6-754P-201ENST00000391166 107 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL109755.1-201ENST00000401791 649 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC068533.1-201ENST00000418542 415 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL645937.1-202ENST00000421799 937 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC093106.2-201ENST00000428212 385 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL118520.1-201ENST00000450770 291 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL121877.1-201ENST00000453704 622 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC233279.1-201ENST00000455300 423 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RNU6-333P-201ENST00000459117 107 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RPL36AP41-201ENST00000493820 306 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 TTC39CP1-201ENST00000512513 755 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RNU6-277P-201ENST00000516272 106 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AL161713.1-201ENST00000555538 145 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 MIR4703-201ENST00000577728 79 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 BMS1P21-201ENST00000634565 365 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 TAB3P1-202ENST00000452645 1634 ntBASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
KCMF1Q9P0J7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
KCMF1Q9P0J7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RNA5SP443-201ENST00000363083 132 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.184-201ENST00000363884 108 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.373-201ENST00000365600 103 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 Y_RNA.419-201ENST00000384041 102 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RNU6-398P-201ENST00000384143 109 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AL583835.1-201ENST00000399570 407 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RNU2-29P-201ENST00000410423 189 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC114491.1-201ENST00000416095 246 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RPS26P2-201ENST00000440331 348 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RPL21P133-201ENST00000443666 476 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RPL23AP43-201ENST00000446445 471 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 MTCO3P9-201ENST00000506989 781 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC021146.3-201ENST00000511911 260 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AF186190.1-201ENST00000517470 480 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC068446.3-201ENST00000555285 382 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 NCAPGP2-201ENST00000557911 754 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC015912.2-201ENST00000571053 181 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC005498.1-201ENST00000592125 465 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC006254.3-201ENST00000603353 884 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC021646.1-201ENST00000605469 484 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 MIR6780A-201ENST00000615089 68 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AC025034.2-201ENST00000623264 286 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 AP004289.2-201ENST00000444413 1457 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.71
KCMF1Q9P0J7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 AC022893.2-201ENST00000564832 3296 ntBASIC4.39□□□□□ -1.71
KCMF1Q9P0J7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms