Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MTND1P34-201ENST00000438556 671 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC069285.2-201ENST00000440210 275 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC079781.2-201ENST00000446424 169 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RPL37P6-201ENST00000460682 294 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RN7SL610P-201ENST00000463845 291 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 PPIAP15-201ENST00000479662 484 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC105252.1-201ENST00000503089 286 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 PARP4P3-201ENST00000510265 317 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RNU6-1092P-201ENST00000516955 87 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 NRON-201ENST00000517270 370 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 DUXAP2-201ENST00000519198 589 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AP006289.1-201ENST00000538089 277 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC006064.5-201ENST00000541782 248 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 ARL2BPP2-201ENST00000550907 489 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL109766.1-201ENST00000555080 552 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL845331.3-202ENST00000562856 261 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC068790.6-201ENST00000602558 258 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 MIR432-201ENST00000606207 94 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC007546.1-201ENST00000619452 559 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RMST_9.1-201ENST00000619945 193 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX56Q9NY93 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX56Q9NY93 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 OTUD4P1-201ENST00000237841 3067 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 RNU6-259P-201ENST00000383999 107 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 RNU6-1197P-201ENST00000391183 107 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 FAT1P1-201ENST00000406588 507 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 BX842559.1-201ENST00000419615 532 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC245054.1-201ENST00000420944 258 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC010975.2-201ENST00000427781 588 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 HMGB1P27-201ENST00000431429 603 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC011998.1-201ENST00000433403 117 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC009237.8-201ENST00000445492 379 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 SNRPGP6-201ENST00000451124 220 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 CEACAMP10-202ENST00000495431 496 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 RNU6-1256P-201ENST00000516539 103 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 RPS3AP4-201ENST00000555161 764 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 AC093227.2-201ENST00000589357 285 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.49□□□□□ -1.69
DDX56Q9NY93 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
DDX56Q9NY93 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
DDX56Q9NY93 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DDX56Q9NY93 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 RNU6-960P-201ENST00000364056 120 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 RNA5SP513-201ENST00000364648 118 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 NDUFS5P1-201ENST00000405668 289 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 RNU2-36P-201ENST00000410361 191 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 RN7SKP33-201ENST00000410942 340 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 OR2AS1P-201ENST00000427827 319 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 SNRPEP4-201ENST00000435815 279 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 GAPDHP27-201ENST00000447427 1020 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 RPL35AP28-201ENST00000459730 331 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC017037.1-201ENST00000508460 471 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.48□□□□□ -1.69
DDX56Q9NY93 RNU6-410P-201ENST00000517006 107 ntBASIC4.48□□□□□ -1.69
DDX56Q9NY93 RN7SKP258-201ENST00000517151 304 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms