Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RPL23AP20-201ENST00000447965 421 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AL049714.1-201ENST00000466686 347 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC068587.1-201ENST00000483613 781 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RPL30P5-201ENST00000494923 336 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC034159.1-201ENST00000513885 583 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RN7SKP122-201ENST00000515923 296 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 ISCA1P3-201ENST00000577104 373 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 MIR4999-201ENST00000585029 91 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC006116.10-201ENST00000591836 581 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC112187.2-201ENST00000604345 283 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC008962.1-201ENST00000605729 304 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC034229.4-201ENST00000607861 441 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 MIR3653-201ENST00000625572 110 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC011460.1-201ENST00000636268 1834 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC092447.7-201ENST00000422212 1621 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 CD24P4-201ENST00000382840 243 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 SNORA56-201ENST00000383966 129 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RPL21P3-201ENST00000395517 478 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL590084.2-201ENST00000401481 382 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RPL19P1-201ENST00000411635 428 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 NDUFB4P7-201ENST00000423198 363 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL691449.1-201ENST00000426570 421 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RSU1P2-202ENST00000437884 485 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL591503.2-201ENST00000442314 1005 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RPS3AP46-201ENST00000448352 682 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AP000542.1-201ENST00000448473 371 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AP1S2P1-201ENST00000457344 379 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP310-201ENST00000459084 116 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC109464.2-201ENST00000510242 943 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC087276.1-201ENST00000529659 480 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 HSPE1P20-201ENST00000538133 289 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 OR7K1P-201ENST00000546439 926 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC021171.1-201ENST00000603137 706 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC008745.1-201ENST00000604064 271 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC093424.1-201ENST00000604999 338 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC013476.2-201ENST00000614456 459 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AC021755.4-201ENST00000616620 456 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.36□□□□□ -1.87
CHCHD3Q9NX63 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 MTND5P19-201ENST00000424872 1794 ntBASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 AL391994.1-201ENST00000254724 282 ntBASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 RNU6-777P-201ENST00000364265 104 ntBASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 RNU6-853P-201ENST00000364306 107 ntBASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 RNU6-1027P-201ENST00000383998 107 ntBASIC3.35□□□□□ -1.87
CHCHD3Q9NX63 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms