Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC005592.1-201ENST00000566527 1640 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 XIAPP3-201ENST00000312918 795 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 RNU6-393P-201ENST00000384475 107 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 Y_RNA.512-201ENST00000384518 102 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 RNU6-95P-201ENST00000384697 107 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 RNU6-1109P-201ENST00000391187 107 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 SNORA77-201ENST00000408716 125 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 UBE2FP1-201ENST00000416536 447 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC093655.2-201ENST00000425735 631 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 Z92846.1-201ENST00000456203 268 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 RN7SL432P-201ENST00000484057 298 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 RPL23AP55-201ENST00000498163 452 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC116655.1-201ENST00000508324 901 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC107222.1-201ENST00000510899 637 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 Y_RNA.719-201ENST00000517156 106 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 MIR4505-201ENST00000582238 73 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC007566.2-201ENST00000603642 413 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC008162.1-201ENST00000604718 254 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AL670379.4-201ENST00000605279 254 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 U2.17-201ENST00000611454 95 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC244100.4-201ENST00000617747 388 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 SNHG22-203ENST00000617833 660 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC107068.1-201ENST00000563286 4218 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 AC093849.1-201ENST00000563631 2209 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
SSU72Q9NP77 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC009643.2-201ENST00000603543 1448 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 IQCB2P-201ENST00000401788 1633 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AP000756.2-201ENST00000624168 2567 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC091812.1-201ENST00000432235 1948 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU1-83P-201ENST00000363426 164 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU6-128P-201ENST00000383976 107 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU6-339P-201ENST00000384310 107 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 Y_RNA.485-201ENST00000384395 102 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC011933.1-201ENST00000413334 321 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 DPH3P2-201ENST00000422618 250 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 FAR2P4-202ENST00000425399 584 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AL390119.1-201ENST00000440329 312 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RPL23AP33-201ENST00000442301 452 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 SNORD5.1-201ENST00000458800 75 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RPS4XP20-201ENST00000505751 772 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU6-941P-201ENST00000516346 108 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU6-388P-201ENST00000517012 105 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 RNU6-389P-201ENST00000517048 105 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC011853.1-201ENST00000518911 454 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AP001922.4-201ENST00000526967 290 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC023442.1-201ENST00000531247 422 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC026470.2-201ENST00000561492 181 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC106782.4-201ENST00000568264 210 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AL589994.2-201ENST00000621124 579 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 PCAT14-202ENST00000627127 3935 ntBASIC4.98□□□□□ -1.61
SSU72Q9NP77 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SSU72Q9NP77 AC083843.3-201ENST00000623679 2186 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms