Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 CYCSP43-201ENST00000438233 310 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 HMGB3P9-201ENST00000441799 583 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC073264.2-201ENST00000448886 166 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 RPS11P1-201ENST00000451072 473 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC025164.1-201ENST00000496249 478 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AP004371.1-201ENST00000525240 214 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AP006289.1-201ENST00000538089 277 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC012182.1-201ENST00000570133 895 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 RN7SL690P-201ENST00000582087 240 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC006116.10-201ENST00000591836 581 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC005261.5-201ENST00000596280 355 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AL022099.1-201ENST00000604551 712 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AP001486.3-201ENST00000615334 372 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 ASNSP3-201ENST00000451989 1306 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM39Q9HCM9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RNU6-552P-201ENST00000362869 119 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RNU6-173P-201ENST00000364215 104 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 Y_RNA.263-201ENST00000364659 114 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RPS16P5-201ENST00000406501 404 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RN7SKP106-201ENST00000410832 272 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 CALM2P2-201ENST00000428512 440 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 UBE2V1P7-201ENST00000446395 340 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 RPL23AP11-201ENST00000475260 469 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC091885.1-201ENST00000506658 268 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 OR5B10P-201ENST00000532869 642 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC007424.1-203ENST00000554613 687 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 OR4H12P-201ENST00000556269 907 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 BNIP3P5-201ENST00000562290 498 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 MIR4703-201ENST00000577728 79 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC013553.2-201ENST00000604244 589 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 SNORD91B-202ENST00000608459 222 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC019193.2-201ENST00000610012 634 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AL589994.2-201ENST00000621124 579 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 SALL4P2-201ENST00000423288 2910 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AC074029.4-201ENST00000624796 1859 ntBASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM39Q9HCM9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 RNU6-1287P-201ENST00000362914 107 ntBASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 RNU6-1060P-201ENST00000384664 107 ntBASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 RNU6-903P-201ENST00000391270 109 ntBASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 Z98745.1-201ENST00000402553 494 ntBASIC4.63□□□□□ -1.67
TRIM39Q9HCM9 AL162578.1-201ENST00000406202 378 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms