Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AC090229.1-201ENST00000590983 1609 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AC006390.1-201ENST00000508068 283 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AP003467.2-201ENST00000520175 319 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AC006116.7-201ENST00000590141 756 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 U73479.1-201ENST00000618062 168 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 AC091895.1-201ENST00000624494 256 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
CHD8Q9HCK8 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.72□□□□□ -2.13
CHD8Q9HCK8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CHD8Q9HCK8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 Y_RNA.549-201ENST00000384657 102 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 MIR1294-201ENST00000408503 142 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AIMP1P1-201ENST00000418670 937 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AL358176.2-201ENST00000425769 204 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 PTP4A1P6-201ENST00000531034 478 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 EXTL2P1-201ENST00000446218 416 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 RPL36AP33-201ENST00000450395 310 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 RPS3AP22-201ENST00000488297 769 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 AF186190.1-201ENST00000517470 480 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 BNIP3P7-201ENST00000605641 516 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 STMN1P1-201ENST00000617809 440 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 HPVC1-201ENST00000629899 1198 ntBASIC1.71□□□□□ -2.14
CHD8Q9HCK8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CHD8Q9HCK8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 DBF4P1-201ENST00000412976 1892 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 RPS15AP6-201ENST00000420703 385 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 SETP10-201ENST00000424368 814 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC005297.2-201ENST00000450430 606 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AP002345.1-201ENST00000456493 928 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 TTC39CP1-201ENST00000512513 755 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 RNU6-1231P-201ENST00000517185 103 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 MIR338-201ENST00000636369 67 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC018630.2-202ENST00000422992 927 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 AC092881.1-201ENST00000638218 2733 ntBASIC1.7□□□□□ -2.14
CHD8Q9HCK8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.7□□□□□ -2.14
CHD8Q9HCK8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 RNU6-666P-201ENST00000363499 107 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 U8.8-201ENST00000365399 135 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 MIR708-201ENST00000390708 88 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AL513331.1-201ENST00000411908 397 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC109471.1-201ENST00000511631 612 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC109446.2-201ENST00000567872 497 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 PSMA6P4-201ENST00000603247 718 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 RNU6-716P-201ENST00000365621 103 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 SET-203ENST00000372688 801 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 TAS2R15P-201ENST00000390674 928 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 MTCYBP17-201ENST00000503579 789 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC090819.1-201ENST00000523800 1111 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC103987.3-201ENST00000582071 292 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 AC022960.2-201ENST00000616300 666 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 BX649567.1-201ENST00000642071 1134 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.69□□□□□ -2.14
CHD8Q9HCK8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 RNU1-139P-201ENST00000391307 165 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL356806.1-201ENST00000422524 916 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 ARPC3P1-201ENST00000437218 533 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 RPL23AP14-201ENST00000468281 468 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms