Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL157786.1-207ENST00000627771 695 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC110994.2-201ENST00000635481 492 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 AC092125.1-201ENST00000562568 1995 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
USP29Q9HBJ7 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
USP29Q9HBJ7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 FRG1BP-201ENST00000278882 761 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RNU6-339P-201ENST00000384310 107 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 GSTA9P-201ENST00000406231 611 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR1250-201ENST00000408098 113 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL359704.1-201ENST00000411586 781 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 OR51AB1P-201ENST00000429046 620 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 ATP5HP2-201ENST00000433885 485 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RPL7P52-201ENST00000449200 742 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AP1S2P1-201ENST00000457344 379 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RNU6-314P-201ENST00000516574 104 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 SNORA67.7-201ENST00000516664 135 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AP003497.1-201ENST00000528472 562 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC123904.2-201ENST00000548059 300 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL133241.1-201ENST00000556832 487 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL391840.1-201ENST00000571144 367 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC090615.1-201ENST00000577519 154 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR4429-201ENST00000580105 73 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR3158-1-201ENST00000583596 81 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 DUXAP4-201ENST00000603046 613 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL009028.1-201ENST00000604895 802 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 OR10AB1P-201ENST00000609613 938 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR6868-201ENST00000611215 58 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL592295.2-201ENST00000612578 206 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC006133.1-201ENST00000617106 264 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 MIR6875-201ENST00000617506 72 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL158209.2-201ENST00000619266 216 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC012150.2-201ENST00000621300 544 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AL133412.1-201ENST00000380194 2992 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 RLIMP1-201ENST00000339626 1680 ntBASIC4.1□□□□□ -1.75
USP29Q9HBJ7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP29Q9HBJ7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RNU6-359P-201ENST00000365466 108 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RNU2-15P-201ENST00000410692 191 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 ISCA1P6-201ENST00000427740 390 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC087650.1-201ENST00000431445 468 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AL358934.1-201ENST00000432346 324 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AL049734.2-201ENST00000441066 616 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RPL23AP33-201ENST00000442301 452 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 PSPHP1-201ENST00000450062 261 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RPS11P1-201ENST00000451072 473 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 NPM1P41-201ENST00000512920 831 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 RNU4-60P-201ENST00000517239 135 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC023632.4-201ENST00000517783 191 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms