Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 IGLV3-17-201ENST00000519099 244 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 RPP40P2-201ENST00000603596 712 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC090953.1-201ENST00000604305 1092 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 ELOCP34-201ENST00000604436 327 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC103988.1-201ENST00000566382 2177 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCAPERQ9BY12 EIF1AXP1-201ENST00000419267 435 ntBASIC2.77□□□□□ -1.97
SCAPERQ9BY12 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.77□□□□□ -1.97
SCAPERQ9BY12 GTF2IP9-201ENST00000502460 301 ntBASIC2.77□□□□□ -1.97
SCAPERQ9BY12 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCAPERQ9BY12 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.77□□□□□ -1.97
SCAPERQ9BY12 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.77□□□□□ -1.97
SCAPERQ9BY12 AP000553.5-201ENST00000641933 54 ntBASIC2.77□□□□□ -1.97
SCAPERQ9BY12 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 HMGB3P2-201ENST00000411913 584 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AL009174.1-201ENST00000426577 416 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 HMGB1P27-201ENST00000431429 603 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 HMGB1P31-201ENST00000437242 427 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 HMGB3P21-201ENST00000452483 547 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC025033.1-201ENST00000463883 194 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC109486.1-201ENST00000486833 374 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC107393.1-201ENST00000512403 346 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 MIR4474-201ENST00000579189 78 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 MIR5194-201ENST00000582634 120 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC009314.1-201ENST00000603871 304 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 VIS1.1-201ENST00000610517 203 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 CFTRP2-201ENST00000634304 199 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 RNA5SP160-201ENST00000364866 120 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC013268.2-201ENST00000420753 337 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 RPL23AP58-201ENST00000440453 469 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 RPL23AP7-203ENST00000449021 469 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 HMGB3P15-201ENST00000507326 574 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AL035411.2-201ENST00000604022 421 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 AC010200.2-201ENST00000605098 235 ntBASIC2.76□□□□□ -1.97
SCAPERQ9BY12 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 RNU4-74P-201ENST00000411280 161 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 AP000275.1-201ENST00000411943 390 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 RPS7P9-201ENST00000414704 586 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 DPPA3P1-201ENST00000448050 469 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 SNRPGP9-201ENST00000456025 225 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 AP000790.1-201ENST00000528891 737 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 AC234775.3-201ENST00000564612 656 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.75□□□□□ -1.97
SCAPERQ9BY12 DCAF13P1-201ENST00000495256 1330 ntBASIC2.75□□□□□ -1.97
SCAPERQ9BY12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 MTCO1P6-201ENST00000481192 1384 ntBASIC2.74□□□□□ -1.97
SCAPERQ9BY12 AC090096.1-201ENST00000489168 390 ntBASIC2.74□□□□□ -1.97
SCAPERQ9BY12 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 RN7SKP5-201ENST00000517045 272 ntBASIC2.74□□□□□ -1.97
SCAPERQ9BY12 MIR5694-201ENST00000581190 76 ntBASIC2.74□□□□□ -1.97
SCAPERQ9BY12 AP001542.2-201ENST00000593141 364 ntBASIC2.74□□□□□ -1.97
SCAPERQ9BY12 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCAPERQ9BY12 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCAPERQ9BY12 Y_RNA.466-201ENST00000384294 113 ntBASIC2.73□□□□□ -1.97
SCAPERQ9BY12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SCAPERQ9BY12 RNU2-17P-201ENST00000410290 190 ntBASIC2.73□□□□□ -1.97
SCAPERQ9BY12 BX682237.1-201ENST00000415016 335 ntBASIC2.73□□□□□ -1.97
SCAPERQ9BY12 MTND2P2-201ENST00000434633 945 ntBASIC2.73□□□□□ -1.97
SCAPERQ9BY12 AL021397.1-201ENST00000451806 248 ntBASIC2.73□□□□□ -1.97
SCAPERQ9BY12 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.73□□□□□ -1.97
SCAPERQ9BY12 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.73□□□□□ -1.97
SCAPERQ9BY12 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SCAPERQ9BY12 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 RNU1-57P-201ENST00000384491 166 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 RNA5SP338-201ENST00000410495 85 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 XKRYP4-201ENST00000414395 483 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 HSPE1P1-201ENST00000421494 318 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.72□□□□□ -1.97
SCAPERQ9BY12 XKRYP5-201ENST00000449659 483 ntBASIC2.72□□□□□ -1.97
SCAPERQ9BY12 RNU6-717P-201ENST00000459076 104 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms