Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ACA64.4-201ENST00000459070 127 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC091179.1-201ENST00000461606 579 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC008481.1-201ENST00000463278 396 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 RPL9P9-202ENST00000466501 579 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC114982.1-201ENST00000469402 321 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC092824.1-201ENST00000483524 576 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC140059.1-201ENST00000489238 361 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AMZ2P1-203ENST00000565833 850 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 MIR4273-201ENST00000582824 84 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 MIR4293-201ENST00000584305 78 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 MIR6853-201ENST00000619642 74 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 EXOC5P1-201ENST00000510543 1969 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 EOGT-210ENST00000615922 1931 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP191-201ENST00000362585 102 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 RN7SKP280-201ENST00000364196 304 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.586-201ENST00000391146 98 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 RNU6-918P-201ENST00000391219 106 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 MIR1204-201ENST00000408388 67 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 U3.42-201ENST00000408746 214 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 AC092423.1-201ENST00000430165 186 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 ATP5LP5-201ENST00000483050 299 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 HSPD1P8-201ENST00000400121 1658 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 AC009951.1-201ENST00000623674 2614 ntBASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.52□□□□□ -1.53
COL25A1Q9BXS0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC009779.8-201ENST00000641684 4384 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP447-201ENST00000363749 119 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.292-201ENST00000364904 97 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RNU6-1035P-201ENST00000384477 107 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RPS4XP7-201ENST00000406274 780 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP107-201ENST00000411358 122 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 DDX39BP1-205ENST00000422507 192 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RPL23AP1-201ENST00000428990 471 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 MTND3P9-201ENST00000429526 346 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AL162725.1-201ENST00000435405 301 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 MRPS21P3-201ENST00000436696 262 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RNU7-138P-201ENST00000459479 64 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 SNORD116-28-201ENST00000516123 91 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP373-201ENST00000517271 95 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 IGLV3-24-201ENST00000517477 197 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC109479.2-201ENST00000517842 174 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms