Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SNORD115.1-201ENST00000391109 76 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 Y_RNA.608-201ENST00000410647 95 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL513174.1-201ENST00000423182 629 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC002075.2-201ENST00000425207 252 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 MTCO2P11-201ENST00000431069 680 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 MTCYBP45-201ENST00000435243 565 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC009961.2-201ENST00000435771 251 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL590365.1-201ENST00000450788 243 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 NDUFA5P7-201ENST00000452914 242 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 UBE2CP3-201ENST00000502715 450 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 IGKV2-36-201ENST00000519999 223 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 NRBF2P1-201ENST00000587407 859 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC097468.3-201ENST00000607956 456 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AL592437.2-201ENST00000421655 2434 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AP004289.2-201ENST00000444413 1457 ntBASIC4.49□□□□□ -1.69
SALL3Q9BXA9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SALL3Q9BXA9 RNA5SP51-201ENST00000364750 119 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RNU6-534P-201ENST00000364877 106 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 MIR670-201ENST00000390142 98 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RNA5SP171-201ENST00000391071 115 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RPL32P23-201ENST00000397237 405 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AL391417.1-201ENST00000404100 426 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RN7SKP266-201ENST00000410232 287 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RPL21P111-201ENST00000418453 477 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 PIGFP2-201ENST00000421400 651 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AL445584.1-201ENST00000431451 330 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 NOTCH2P1-201ENST00000443481 624 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 MTCO1P27-201ENST00000448269 226 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC007967.1-201ENST00000455422 1159 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 RPS29P25-201ENST00000481709 171 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC013828.1-201ENST00000481845 158 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC106872.3-201ENST00000495104 446 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC010493.1-201ENST00000513479 292 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AP003467.2-201ENST00000520175 319 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC060780.3-201ENST00000589464 80 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AP001521.1-201ENST00000609150 300 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC103710.4-201ENST00000609301 899 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AL020991.1-201ENST00000612314 373 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 MIR6075-201ENST00000620782 95 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 PISRT1-201ENST00000626175 531 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AC092326.2-201ENST00000624772 1561 ntBASIC4.48□□□□□ -1.69
SALL3Q9BXA9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.48□□□□□ -1.69
SALL3Q9BXA9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.47□□□□□ -1.69
SALL3Q9BXA9 Y_RNA.295-201ENST00000364918 102 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms