Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 HSPD1P15-201ENST00000505573 1122 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC026427.2-201ENST00000506228 536 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC103851.1-201ENST00000506833 274 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC011979.2-201ENST00000527568 352 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL161713.1-201ENST00000555538 145 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC136624.4-201ENST00000573044 370 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 MTCO3P13-201ENST00000577757 781 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC091979.2-201ENST00000607514 214 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RMST_7.1-201ENST00000621935 268 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 TPTEP1-208ENST00000636884 213 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 ASNSP1-201ENST00000518311 1939 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC027287.1-201ENST00000553115 1453 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU5E-8P-201ENST00000363502 116 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-1078P-201ENST00000364522 103 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC019155.1-201ENST00000382242 574 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-692P-201ENST00000384496 107 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-606P-201ENST00000384721 111 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-821P-201ENST00000390995 107 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 VDAC1P9-201ENST00000412766 841 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AF228730.4-201ENST00000421457 183 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 SRIP2-201ENST00000428470 166 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RPS27AP12-201ENST00000429552 465 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 DDX3P2-201ENST00000446138 111 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC009963.2-201ENST00000453431 138 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC005008.1-201ENST00000456151 612 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU7-59P-201ENST00000459101 61 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC083829.1-201ENST00000503756 657 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC021146.3-201ENST00000511911 260 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC017037.2-201ENST00000513850 890 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-277P-201ENST00000516272 106 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RN7SKP116-201ENST00000516902 319 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RNU6-798P-201ENST00000516912 103 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 BTF3P12-201ENST00000519620 469 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AP003385.6-201ENST00000531603 374 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RPL21P12-201ENST00000559810 515 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC105224.1-201ENST00000587055 421 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 GLUD1P4-201ENST00000590914 418 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC022432.1-201ENST00000595739 310 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC007687.1-201ENST00000602704 304 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AL161729.3-201ENST00000603533 673 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 AC090948.1-201ENST00000607464 549 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 uc_338.5-201ENST00000611839 155 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 MIR6830-201ENST00000636015 70 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 MIR1302-1-201ENST00000637932 143 ntBASIC4.3□□□□□ -1.72
NDC1Q9BTX1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NDC1Q9BTX1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms