Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 MIR4496-201ENST00000635896 61 ntBASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 AC008013.2-202ENST00000637965 364 ntBASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 AC000374.1-201ENST00000434698 1745 ntBASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 AC103710.2-202ENST00000641454 2853 ntBASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTCHD1Q96NR3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 INTS6P1-201ENST00000504674 2530 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 Y_RNA.28-201ENST00000362554 111 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RNU6-463P-201ENST00000384340 107 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RN7SKP125-201ENST00000410481 302 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AF186996.5-201ENST00000418098 904 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL360081.1-201ENST00000428299 555 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 CALM2P2-201ENST00000428512 440 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 MTND1P17-201ENST00000448961 204 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RPS15AP27-201ENST00000449183 343 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RPL30P15-201ENST00000457129 321 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RBBP4P6-201ENST00000508098 202 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 MTCYBP40-201ENST00000509390 1135 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 SMURF2P1-201ENST00000514992 481 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 SNORD116-26-201ENST00000516006 96 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC022790.1-201ENST00000522872 204 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC012339.2-201ENST00000523996 453 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC018630.1-201ENST00000541376 925 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC135001.1-201ENST00000544546 283 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC063950.1-201ENST00000552036 308 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC068446.3-201ENST00000555285 382 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC006349.1-201ENST00000555526 235 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC138761.3-201ENST00000579993 334 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC008521.1-201ENST00000587471 187 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC023043.2-201ENST00000589678 1026 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL670379.6-201ENST00000603753 252 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC008162.1-201ENST00000604718 254 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL670379.1-201ENST00000604752 252 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL670379.5-201ENST00000605253 252 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL670379.8-201ENST00000605353 252 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AL670379.7-201ENST00000605823 252 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 AC103705.1-201ENST00000619013 241 ntBASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
PTCHD1Q96NR3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 MTND5P10-201ENST00000603719 1809 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC104623.2-202ENST00000623477 4002 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RN7SKP95-201ENST00000362860 303 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 SNORA51.8-201ENST00000384234 132 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 Y_RNA.482-201ENST00000384377 111 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RNA5SP219-201ENST00000390940 113 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 U3.32-201ENST00000408116 212 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC092447.6-201ENST00000414578 210 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC113618.1-201ENST00000416747 285 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL391219.1-201ENST00000422570 483 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 SKA2P1-201ENST00000425592 390 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms