Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 SNORA36C-201ENST00000384289 132 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC110754.1-201ENST00000399740 601 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RNA5SP36-201ENST00000410197 133 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RNA5SP306-201ENST00000411087 107 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 C1DP2-201ENST00000418167 426 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC008850.1-201ENST00000427546 362 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC137499.1-201ENST00000427602 88 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 RPL23AP89-201ENST00000439324 255 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC008481.1-201ENST00000463278 396 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 MTCO2P29-201ENST00000465212 189 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RN7SL303P-201ENST00000469773 251 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RN7SL691P-201ENST00000494487 301 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC017037.1-201ENST00000508460 471 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 CDC42P4-201ENST00000510507 563 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC114797.1-201ENST00000514003 728 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RN7SKP298-201ENST00000515950 94 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RNA5SP49-201ENST00000516450 115 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 MIR3138-201ENST00000585238 82 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AP001029.3-201ENST00000588063 596 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC087683.1-201ENST00000591187 441 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC244505.7-201ENST00000599675 272 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 MIR432-201ENST00000606207 94 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL139286.2-201ENST00000606838 396 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 AC006338.1-201ENST00000618453 749 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 MIR7702-201ENST00000621931 59 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL445363.3-201ENST00000623080 671 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 AL136313.1-201ENST00000624804 202 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 OR52H1-202ENST00000641796 1061 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC138Q96M89 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC138Q96M89 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC138Q96M89 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC138Q96M89 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC116667.1-201ENST00000604855 2072 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 RNU5E-1-201ENST00000362477 120 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 MIR1290-201ENST00000408735 78 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 ISCA1P6-201ENST00000427740 390 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 DLGAP5P1-201ENST00000430307 464 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 USP12PX-201ENST00000432383 1057 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 USP9YP15-201ENST00000442391 422 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 HMGB3P22-202ENST00000451823 572 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 TPTE2P5-203ENST00000458118 728 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 KLF3P2-201ENST00000465138 268 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 RPS29P19-201ENST00000479709 171 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC041039.1-201ENST00000485656 536 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC008958.1-201ENST00000511047 682 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 Y_RNA.655-201ENST00000515919 96 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 RNA5SP519-201ENST00000516480 119 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC055876.1-202ENST00000567053 138 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC012213.3-201ENST00000577199 777 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL606834.2-201ENST00000602954 668 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC106900.2-201ENST00000604994 317 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL451064.1-201ENST00000607718 471 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL589743.7-201ENST00000612637 233 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC008498.1-201ENST00000613012 531 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC083809.1-201ENST00000615051 472 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 SNHG22-203ENST00000617833 660 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AC072046.2-201ENST00000618366 268 ntBASIC4.12□□□□□ -1.75
CCDC138Q96M89 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC138Q96M89 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC138Q96M89 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC138Q96M89 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC138Q96M89 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms