Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC012442.3-202ENST00000636742 206 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 U6.101-201ENST00000637707 76 ntBASIC2.35□□□□□ -2.03
LINC00477Q96M19 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
LINC00477Q96M19 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00477Q96M19 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AP000776.1-201ENST00000530032 1663 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC00477Q96M19 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 RNU6-216P-201ENST00000363282 104 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RNU6-777P-201ENST00000364265 104 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 SNORA62.3-201ENST00000365110 153 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 SNORD15B-201ENST00000384714 146 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 MIR200C-201ENST00000384980 68 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 MIR134-201ENST00000385258 73 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC110754.1-201ENST00000399740 601 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 MIR887-201ENST00000401258 79 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 MTND4LP20-201ENST00000402379 270 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RPL7P25-201ENST00000404151 721 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 FAT1P1-201ENST00000406588 507 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RN7SKP220-201ENST00000410611 288 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC092447.6-201ENST00000414578 210 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC245052.5-201ENST00000416320 649 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RPL36AP36-201ENST00000418616 301 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 NIPA2P1-201ENST00000426223 976 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC096632.1-201ENST00000427395 310 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC079780.1-201ENST00000428259 207 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AL117351.1-201ENST00000438864 766 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC108734.1-201ENST00000439549 399 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 EEF1E1P1-201ENST00000446998 430 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 MTCO1P48-201ENST00000448024 1096 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 OFD1P3Y-201ENST00000453312 783 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RPL18AP17-201ENST00000455326 198 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 FAM133DP-201ENST00000464802 691 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 SETP11-201ENST00000473027 690 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 RPL30P14-201ENST00000482744 348 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 BOLA3P3-201ENST00000505182 232 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC009901.1-201ENST00000506703 541 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AP001189.2-201ENST00000527320 189 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC125611.2-201ENST00000551907 647 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 NCAPGP2-201ENST00000557911 754 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC009097.3-201ENST00000563557 1018 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC006130.2-201ENST00000586202 326 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 CKS1BP3-201ENST00000600888 237 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC234772.3-201ENST00000602277 528 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AL133507.1-201ENST00000605269 557 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC006270.3-201ENST00000605967 1036 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC087683.2-201ENST00000611384 326 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC005332.6-201ENST00000613178 446 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC009464.1-201ENST00000615731 469 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC068722.2-201ENST00000618734 544 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC002064.3-201ENST00000623448 346 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LINC00477Q96M19 AC108206.1-201ENST00000570186 4159 ntBASIC2.34□□□□□ -2.03
LINC00477Q96M19 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC00477Q96M19 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.34□□□□□ -2.04
LINC00477Q96M19 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
LINC00477Q96M19 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.34□□□□□ -2.04
LINC00477Q96M19 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 MTCO1P23-201ENST00000415223 1526 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00477Q96M19 SNORD113-6-201ENST00000363345 75 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 SNORD56.5-201ENST00000364281 72 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 Y_RNA.465-201ENST00000384293 102 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RPS4XP3-201ENST00000398541 413 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL023807.1-201ENST00000407932 359 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 BMS1P22-201ENST00000414726 313 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC244505.4-201ENST00000434905 287 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC084290.1-201ENST00000434995 374 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 MTCYBP45-201ENST00000435243 565 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00477Q96M19 RPS25P9-201ENST00000435591 252 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RPL23AP16-201ENST00000441715 421 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 SSXP5-201ENST00000443473 287 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms